Description

Ensembl ID MGP_C57BL6NJ_G0029556 Gene ID Accession -
Symbol Exosc10 Alias - Full Name exosome component 10
Status Confidence Length 23851 bases Strand Plus strand
Position 4 : 157824100 - 157847950 RNA binding domain DNA_pol_A_exo1 , PMC2NT , HRDC
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C57BL6NJ_P0069727 DNA_pol_A_exo1 PF01612 6.9e-49 1
MGP_C57BL6NJ_P0069727 PMC2NT PF08066 7e-22 2
MGP_C57BL6NJ_P0069727 HRDC PF00570 1.6e-13 3
MGP_C57BL6NJ_P0069728 DNA_pol_A_exo1 PF01612 1.2e-48 1
MGP_C57BL6NJ_P0069728 PMC2NT PF08066 1.1e-21 2
MGP_C57BL6NJ_P0069728 HRDC PF00570 3e-14 3
MGP_C57BL6NJ_P0069725 DNA_pol_A_exo1 PF01612 1.2e-48 1
MGP_C57BL6NJ_P0069725 PMC2NT PF08066 1.1e-21 2
MGP_C57BL6NJ_P0069725 HRDC PF00570 3.2e-14 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Exosc10-001 MGP_C57BL6NJ_T0069725 2790 887aa MGP_C57BL6NJ_P0069725"/note="transcript_id=MGP_C57BL6NJ_T0069725
- MGP_C57BL6NJ_T0069726 2773 No protein -
- MGP_C57BL6NJ_T0069727 2816 618aa MGP_C57BL6NJ_P0069727"/note="transcript_id=MGP_C57BL6NJ_T0069727
- MGP_C57BL6NJ_T0069728 2682 862aa MGP_C57BL6NJ_P0069728"/note="transcript_id=MGP_C57BL6NJ_T0069728
- MGP_C57BL6NJ_T0069729 306 30aa MGP_C57BL6NJ_P0069729"/note="transcript_id=MGP_C57BL6NJ_T0069729
- MGP_C57BL6NJ_T0069730 1188 No protein -
- MGP_C57BL6NJ_T0069731 1195 No protein -
- MGP_C57BL6NJ_T0069732 401 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P005735039.298224.5614mus_musculus_c57bl6njMGP_C57BL6NJ_P006972525.253715.7835

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972598.872698.5344mus_caroliMGP_CAROLIEiJ_P006578798.872698.5344
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_ajMGP_AJ_P006931299.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_balbcjMGP_BALBcJ_P006922999.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_129s1svimjMGP_129S1SvImJ_P006924899.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_lpjMGP_LPJ_P006906099.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_c3hhejMGP_C3HHeJ_P006889899.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P0069725100100mus_musculusENSMUSP00000017408100100
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_cbajMGP_CBAJ_P006883899.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972598.196297.1815mus_pahariMGP_PahariEiJ_P008089598.196297.1815
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.436399.4363mus_spretusMGP_SPRETEiJ_P006836499.436399.4363
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P0069725100100mus_musculus_fvbnjMGP_FVBNJ_P0068874100100
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.661899.549mus_spicilegusENSMSIP0000001372799.661899.549
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_dba2jMGP_DBA2J_P006897499.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_wsbeijMGP_WSBEiJ_P006806299.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_casteijMGP_CASTEiJ_P006936399.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_nzohlltjMGP_NZOHlLtJ_P006990999.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_pwkphjMGP_PWKPhJ_P006885999.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_nodshiltjMGP_NODShiLtJ_P006889199.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972599.887399.7745mus_musculus_akrjMGP_AKRJ_P006921799.887399.7745
MGP_C57BL6NJ_G0029556mus_musculus_c57bl6njMGP_C57BL6NJ_P006972596.95695.2649rattus_norvegicusENSRNOP0000001462997.175195.4802

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression