Description

Ensembl ID MGP_C57BL6NJ_G0028673 Gene ID Accession -
Symbol Ncbp1 Alias - Full Name nuclear cap binding protein subunit 1
Status Confidence Length 35627 bases Strand Plus strand
Position 4 : 46066932 - 46102558 RNA binding domain MIF4G_like , MIF4G_like_2 , MIF4G
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C57BL6NJ_P0066045 MIF4G_like PF09088 7.8e-35 1
MGP_C57BL6NJ_P0066045 MIF4G_like_2 PF09090 1.7e-86 2
MGP_C57BL6NJ_P0066045 MIF4G PF02854 9.7e-31 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Ncbp1-001 MGP_C57BL6NJ_T0066045 3010 790aa MGP_C57BL6NJ_P0066045"/note="transcript_id=MGP_C57BL6NJ_T0066045
- MGP_C57BL6NJ_T0066047 474 No protein -
- MGP_C57BL6NJ_T0066048 781 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0028673

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_caroliMGP_CAROLIEiJ_P0062244100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_ajMGP_AJ_P0065646100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_balbcjMGP_BALBcJ_P0065575100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0065591100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_lpjMGP_LPJ_P0065431100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_c3hhejMGP_C3HHeJ_P0065246100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculusENSMUSP00000030014100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_cbajMGP_CBAJ_P0065193100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P006604599.873499.6203mus_pahariMGP_PahariEiJ_P007738299.873499.6203
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_spretusMGP_SPRETEiJ_P0064714100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_fvbnjMGP_FVBNJ_P0065255100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P006604593.92493.038mus_spicilegusENSMSIP0000002429186.279185.4651
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_dba2jMGP_DBA2J_P0065326100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_wsbeijMGP_WSBEiJ_P0064451100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_casteijMGP_CASTEiJ_P0065561100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0066217100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_pwkphjMGP_PWKPhJ_P0065107100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0065236100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P0066045100100mus_musculus_akrjMGP_AKRJ_P0065535100100
MGP_C57BL6NJ_G0028673mus_musculus_c57bl6njMGP_C57BL6NJ_P006604599.746899.4937rattus_norvegicusENSRNOP0000007759599.746899.4937

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression