RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0028435 | Gene ID |
|
Accession |
- |
Symbol |
Tgs1 |
Alias |
- |
Full Name |
trimethylguanosine synthase 1 |
Status |
Confidence |
Length |
46663 bases |
Strand |
Plus strand |
Position |
4 : 120554 - 167216 |
RNA binding domain |
UPF0020 , Met_10 , Methyltransf_15 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0065000 |
UPF0020 |
PF01170 |
2.1e-05 |
1 |
MGP_C57BL6NJ_P0065000 |
Met_10 |
PF02475 |
4.2e-06 |
2 |
MGP_C57BL6NJ_P0065000 |
Methyltransf_15 |
PF09445 |
6.5e-41 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Tgs1-001 |
MGP_C57BL6NJ_T0065000 |
4327 |
853aa |
MGP_C57BL6NJ_P0065000"/note="transcript_id=MGP_C57BL6NJ_T0065000 |
- |
MGP_C57BL6NJ_T0065001 |
687 |
No protein |
- |
- |
MGP_C57BL6NJ_T0065002 |
544 |
No protein |
- |
- |
MGP_C57BL6NJ_T0065003 |
515 |
No protein |
- |
- |
MGP_C57BL6NJ_T0065004 |
690 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0089099 | 94.6387 | 91.6084 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 95.1934 | 92.1454 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 92.4971 | 91.2075 | mus_caroli | MGP_CAROLIEiJ_P0061296 | 96.4548 | 95.11 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 98.5932 | 97.6553 | mus_caroli | MGP_CAROLIEiJ_P0061295 | 98.7089 | 97.77 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0064584 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0064504 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0064556 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0064409 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0064194 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus | ENSMUSP00000054112 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0064154 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 90.6213 | 87.1043 | mus_pahari | MGP_PahariEiJ_P0056964 | 94.3834 | 90.7204 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 96.6002 | 93.4349 | mus_pahari | MGP_PahariEiJ_P0056963 | 96.4871 | 93.3255 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 56.7409 | 56.272 | mus_spretus | MGP_SPRETEiJ_P0063718 | 97.5806 | 96.7742 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 99.0621 | 98.7104 | mus_spretus | MGP_SPRETEiJ_P0063719 | 99.1784 | 98.8263 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0064223 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 99.6483 | 98.7104 | mus_spicilegus | ENSMSIP00000021139 | 99.6483 | 98.7104 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0064266 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0063451 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 99.7655 | mus_musculus_casteij | MGP_CASTEiJ_P0064513 | 100 | 99.7655 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0065215 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 56.1547 | 44.3142 | mus_musculus_pwkphj | MGP_PWKPhJ_P0064045 | 56.2867 | 44.4183 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0064223 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0064527 | 100 | 100 |
MGP_C57BL6NJ_G0028435 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0065000 | 93.2005 | 87.8077 | rattus_norvegicus | ENSRNOP00000010783 | 93.5294 | 88.1176 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |