Description

Ensembl ID MGP_C57BL6NJ_G0028435 Gene ID Accession -
Symbol Tgs1 Alias - Full Name trimethylguanosine synthase 1
Status Confidence Length 46663 bases Strand Plus strand
Position 4 : 120554 - 167216 RNA binding domain UPF0020 , Met_10 , Methyltransf_15
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C57BL6NJ_P0065000 UPF0020 PF01170 2.1e-05 1
MGP_C57BL6NJ_P0065000 Met_10 PF02475 4.2e-06 2
MGP_C57BL6NJ_P0065000 Methyltransf_15 PF09445 6.5e-41 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tgs1-001 MGP_C57BL6NJ_T0065000 4327 853aa MGP_C57BL6NJ_P0065000"/note="transcript_id=MGP_C57BL6NJ_T0065000
- MGP_C57BL6NJ_T0065001 687 No protein -
- MGP_C57BL6NJ_T0065002 544 No protein -
- MGP_C57BL6NJ_T0065003 515 No protein -
- MGP_C57BL6NJ_T0065004 690 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P008909994.638791.6084mus_musculus_c57bl6njMGP_C57BL6NJ_P006500095.193492.1454

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P006500092.497191.2075mus_caroliMGP_CAROLIEiJ_P006129696.454895.11
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P006500098.593297.6553mus_caroliMGP_CAROLIEiJ_P006129598.708997.77
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculus_ajMGP_AJ_P0064584100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculus_balbcjMGP_BALBcJ_P0064504100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0064556100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculus_lpjMGP_LPJ_P0064409100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculus_c3hhejMGP_C3HHeJ_P0064194100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculusENSMUSP00000054112100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculus_cbajMGP_CBAJ_P0064154100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P006500090.621387.1043mus_pahariMGP_PahariEiJ_P005696494.383490.7204
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P006500096.600293.4349mus_pahariMGP_PahariEiJ_P005696396.487193.3255
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P006500056.740956.272mus_spretusMGP_SPRETEiJ_P006371897.580696.7742
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P006500099.062198.7104mus_spretusMGP_SPRETEiJ_P006371999.178498.8263
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculus_fvbnjMGP_FVBNJ_P0064223100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P006500099.648398.7104mus_spicilegusENSMSIP0000002113999.648398.7104
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculus_dba2jMGP_DBA2J_P0064266100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculus_wsbeijMGP_WSBEiJ_P0063451100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P006500010099.7655mus_musculus_casteijMGP_CASTEiJ_P006451310099.7655
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0065215100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P006500056.154744.3142mus_musculus_pwkphjMGP_PWKPhJ_P006404556.286744.4183
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0064223100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P0065000100100mus_musculus_akrjMGP_AKRJ_P0064527100100
MGP_C57BL6NJ_G0028435mus_musculus_c57bl6njMGP_C57BL6NJ_P006500093.200587.8077rattus_norvegicusENSRNOP0000001078393.529488.1176

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression