RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0027767 | Gene ID |
|
Accession |
- |
Symbol |
Gatb |
Alias |
- |
Full Name |
glutamyl-tRNA(Gln) amidotransferase, subunit B |
Status |
Confidence |
Length |
85547 bases |
Strand |
Plus strand |
Position |
3 : 88759121 - 88844667 |
RNA binding domain |
GatB_Yqey |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0061827 |
GatB_Yqey |
PF02637 |
8.4e-45 |
1 |
MGP_C57BL6NJ_P0061829 |
GatB_Yqey |
PF02637 |
2.2e-33 |
1 |
MGP_C57BL6NJ_P0061828 |
GatB_Yqey |
PF02637 |
2.2e-15 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Gatb-001 |
MGP_C57BL6NJ_T0061827 |
3469 |
557aa |
MGP_C57BL6NJ_P0061827"/note="transcript_id=MGP_C57BL6NJ_T0061827 |
- |
MGP_C57BL6NJ_T0061828 |
1820 |
472aa |
MGP_C57BL6NJ_P0061828"/note="transcript_id=MGP_C57BL6NJ_T0061828 |
- |
MGP_C57BL6NJ_T0061829 |
1980 |
553aa |
MGP_C57BL6NJ_P0061829"/note="transcript_id=MGP_C57BL6NJ_T0061829 |
- |
MGP_C57BL6NJ_T0061830 |
366 |
No protein |
- |
- |
MGP_C57BL6NJ_T0061831 |
1856 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0027767 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 99.1023 | 98.3842 | mus_caroli | MGP_CAROLIEiJ_P0058202 | 99.1023 | 98.3842 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0061425 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0061349 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0061402 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0061254 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0061046 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus | ENSMUSP00000119949 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0061020 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 98.0251 | 96.5889 | mus_pahari | MGP_PahariEiJ_P0069165 | 98.0251 | 96.5889 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 99.8205 | 99.4614 | mus_spretus | MGP_SPRETEiJ_P0060530 | 99.8205 | 99.4614 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0061099 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 94.7935 | 93.5368 | mus_spicilegus | ENSMSIP00000024071 | 79.2793 | 78.2282 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0061113 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0060316 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 99.8205 | mus_musculus_casteij | MGP_CASTEiJ_P0061342 | 100 | 99.8205 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0062013 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0060891 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0061065 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0061361 | 100 | 100 |
MGP_C57BL6NJ_G0027767 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0061827 | 96.0503 | 93.5368 | rattus_norvegicus | ENSRNOP00000092368 | 96.0503 | 93.5368 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |