Description

Ensembl ID MGP_C57BL6NJ_G0027767 Gene ID Accession -
Symbol Gatb Alias - Full Name glutamyl-tRNA(Gln) amidotransferase, subunit B
Status Confidence Length 85547 bases Strand Plus strand
Position 3 : 88759121 - 88844667 RNA binding domain GatB_Yqey
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C57BL6NJ_P0061827 GatB_Yqey PF02637 8.4e-45 1
MGP_C57BL6NJ_P0061829 GatB_Yqey PF02637 2.2e-33 1
MGP_C57BL6NJ_P0061828 GatB_Yqey PF02637 2.2e-15 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Gatb-001 MGP_C57BL6NJ_T0061827 3469 557aa MGP_C57BL6NJ_P0061827"/note="transcript_id=MGP_C57BL6NJ_T0061827
- MGP_C57BL6NJ_T0061828 1820 472aa MGP_C57BL6NJ_P0061828"/note="transcript_id=MGP_C57BL6NJ_T0061828
- MGP_C57BL6NJ_T0061829 1980 553aa MGP_C57BL6NJ_P0061829"/note="transcript_id=MGP_C57BL6NJ_T0061829
- MGP_C57BL6NJ_T0061830 366 No protein -
- MGP_C57BL6NJ_T0061831 1856 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0027767

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P006182799.102398.3842mus_caroliMGP_CAROLIEiJ_P005820299.102398.3842
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_ajMGP_AJ_P0061425100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_balbcjMGP_BALBcJ_P0061349100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0061402100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_lpjMGP_LPJ_P0061254100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_c3hhejMGP_C3HHeJ_P0061046100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculusENSMUSP00000119949100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_cbajMGP_CBAJ_P0061020100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P006182798.025196.5889mus_pahariMGP_PahariEiJ_P006916598.025196.5889
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P006182799.820599.4614mus_spretusMGP_SPRETEiJ_P006053099.820599.4614
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_fvbnjMGP_FVBNJ_P0061099100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P006182794.793593.5368mus_spicilegusENSMSIP0000002407179.279378.2282
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_dba2jMGP_DBA2J_P0061113100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_wsbeijMGP_WSBEiJ_P0060316100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P006182710099.8205mus_musculus_casteijMGP_CASTEiJ_P006134210099.8205
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0062013100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_pwkphjMGP_PWKPhJ_P0060891100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0061065100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P0061827100100mus_musculus_akrjMGP_AKRJ_P0061361100100
MGP_C57BL6NJ_G0027767mus_musculus_c57bl6njMGP_C57BL6NJ_P006182796.050393.5368rattus_norvegicusENSRNOP0000009236896.050393.5368

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression