RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0026765 | Gene ID |
|
Accession |
- |
Symbol |
Exd1 |
Alias |
- |
Full Name |
exonuclease 3'-5' domain containing 1 |
Status |
Confidence |
Length |
31723 bases |
Strand |
Minus strand |
Position |
2 : 126302043 - 126333765 |
RNA binding domain |
DNA_pol_A_exo1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0057350 |
DNA_pol_A_exo1 |
PF01612 |
1.1e-08 |
1 |
MGP_C57BL6NJ_P0057351 |
DNA_pol_A_exo1 |
PF01612 |
1.1e-08 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Exd1-001 |
MGP_C57BL6NJ_T0057350 |
6042 |
570aa |
MGP_C57BL6NJ_P0057350"/note="transcript_id=MGP_C57BL6NJ_T0057350 |
- |
MGP_C57BL6NJ_T0057351 |
5290 |
570aa |
MGP_C57BL6NJ_P0057351"/note="transcript_id=MGP_C57BL6NJ_T0057351 |
- |
MGP_C57BL6NJ_T0057352 |
537 |
98aa |
MGP_C57BL6NJ_P0057352"/note="transcript_id=MGP_C57BL6NJ_T0057352 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0069725 | 25.2537 | 15.7835 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 39.2982 | 24.5614 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 97.5439 | 95.614 | mus_caroli | MGP_CAROLIEiJ_P0053853 | 97.5439 | 95.614 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.6491 | 99.2982 | mus_musculus_aj | MGP_AJ_P0056926 | 99.6491 | 99.2982 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.6491 | 99.2982 | mus_musculus_balbcj | MGP_BALBcJ_P0056868 | 99.6491 | 99.2982 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.4737 | 99.1228 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0056900 | 99.4737 | 99.1228 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.4737 | 99.1228 | mus_musculus_lpj | MGP_LPJ_P0056765 | 99.4737 | 99.1228 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.6491 | 99.2982 | mus_musculus_c3hhej | MGP_C3HHeJ_P0056575 | 99.6491 | 99.2982 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 100 | 100 | mus_musculus | ENSMUSP00000054980 | 100 | 100 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.6491 | 99.2982 | mus_musculus_cbaj | MGP_CBAJ_P0056530 | 99.6491 | 99.2982 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 91.0526 | 88.7719 | mus_pahari | MGP_PahariEiJ_P0064835 | 96.648 | 94.2272 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 98.5965 | 97.5439 | mus_spretus | MGP_SPRETEiJ_P0055953 | 98.5965 | 97.5439 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.4737 | 99.1228 | mus_musculus_fvbnj | MGP_FVBNJ_P0056607 | 99.4737 | 99.1228 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 98.5965 | 97.5439 | mus_spicilegus | ENSMSIP00000031734 | 98.5965 | 97.5439 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.6491 | 99.2982 | mus_musculus_dba2j | MGP_DBA2J_P0056637 | 99.6491 | 99.2982 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.6491 | 99.2982 | mus_musculus_wsbeij | MGP_WSBEiJ_P0055862 | 99.6491 | 99.2982 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.4737 | 99.1228 | mus_musculus_casteij | MGP_CASTEiJ_P0056799 | 99.4737 | 99.1228 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.6491 | 99.2982 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0057511 | 99.6491 | 99.2982 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0056392 | 100 | 100 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.6491 | 99.2982 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0056582 | 99.6491 | 99.2982 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 99.4737 | 99.1228 | mus_musculus_akrj | MGP_AKRJ_P0056881 | 99.4737 | 99.1228 |
MGP_C57BL6NJ_G0026765 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0057350 | 91.4035 | 87.3684 | rattus_norvegicus | ENSRNOP00000038378 | 92.7046 | 88.6121 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |