RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0025914 | Gene ID |
|
Accession |
- |
Symbol |
Surf6 |
Alias |
- |
Full Name |
surfeit gene 6 |
Status |
Confidence |
Length |
14219 bases |
Strand |
Minus strand |
Position |
2 : 25693417 - 25707635 |
RNA binding domain |
SURF6 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0053864 |
SURF6 |
PF04935 |
5.7e-36 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Surf6-003 |
MGP_C57BL6NJ_T0053861 |
1372 |
No protein |
- |
- |
MGP_C57BL6NJ_T0053862 |
653 |
No protein |
- |
- |
MGP_C57BL6NJ_T0053863 |
680 |
No protein |
- |
- |
MGP_C57BL6NJ_T0053864 |
2971 |
355aa |
MGP_C57BL6NJ_P0053864"/note="transcript_id=MGP_C57BL6NJ_T0053864 |
- |
MGP_C57BL6NJ_T0053865 |
894 |
208aa |
MGP_C57BL6NJ_P0053865"/note="transcript_id=MGP_C57BL6NJ_T0053865 |
- |
MGP_C57BL6NJ_T0053866 |
748 |
No protein |
- |
- |
MGP_C57BL6NJ_T0053867 |
372 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0025914 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 97.4648 | 97.1831 | mus_caroli | MGP_CAROLIEiJ_P0050427 | 97.4648 | 97.1831 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0053428 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0053374 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0053417 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0053273 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0053104 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus | ENSMUSP00000048457 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0053050 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 96.338 | 93.8028 | mus_pahari | MGP_PahariEiJ_P0061451 | 96.6102 | 94.0678 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 98.3099 | 98.3099 | mus_spretus | MGP_SPRETEiJ_P0052453 | 98.3099 | 98.3099 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0053120 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 98.3099 | 98.0282 | mus_spicilegus | ENSMSIP00000022566 | 98.3099 | 98.0282 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0053161 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0052388 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 99.7183 | mus_musculus_casteij | MGP_CASTEiJ_P0053274 | 100 | 99.7183 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0053999 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0052876 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0053107 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0053384 | 100 | 100 |
MGP_C57BL6NJ_G0025914 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0053864 | 84.7887 | 80.2817 | rattus_norvegicus | ENSRNOP00000006699 | 92.3313 | 87.4233 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |