Description

Ensembl ID MGP_C57BL6NJ_G0022568 Gene ID Accession -
Symbol Rrp7a Alias - Full Name ribosomal RNA processing 7 homolog A (S. cerevisiae)
Status Confidence Length 12666 bases Strand Minus strand
Position 15 : 87009687 - 87022352 RNA binding domain RRM_Rrp7 , RRP7
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C57BL6NJ_P0042438 RRM_Rrp7 PF17799 1.4e-08 1
MGP_C57BL6NJ_P0042433 RRM_Rrp7 PF17799 2.9e-08 1
MGP_C57BL6NJ_P0042433 RRP7 PF12923 6.4e-35 2
MGP_C57BL6NJ_P0042437 RRM_Rrp7 PF17799 1.8e-07 1
MGP_C57BL6NJ_P0042435 RRP7 PF12923 2.6e-17 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rrp7a-001 MGP_C57BL6NJ_T0042433 4363 280aa MGP_C57BL6NJ_P0042433"/note="transcript_id=MGP_C57BL6NJ_T0042433
- MGP_C57BL6NJ_T0042435 486 50aa MGP_C57BL6NJ_P0042435"/note="transcript_id=MGP_C57BL6NJ_T0042435
- MGP_C57BL6NJ_T0042436 792 No protein -
- MGP_C57BL6NJ_T0042437 492 145aa MGP_C57BL6NJ_P0042437"/note="transcript_id=MGP_C57BL6NJ_T0042437
- MGP_C57BL6NJ_T0042438 759 163aa MGP_C57BL6NJ_P0042438"/note="transcript_id=MGP_C57BL6NJ_T0042438

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0022568

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P004243398.928697.8571mus_caroliMGP_CAROLIEiJ_P003923198.928697.8571
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P004243340.714340mus_musculus_ajMGP_AJ_P004195778.620777.2414
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P004243340.714340mus_musculus_balbcjMGP_BALBcJ_P004195378.620777.2414
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P0042433100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0041993100100
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P0042433100100mus_musculus_lpjMGP_LPJ_P0041812100100
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P0042433100100mus_musculus_c3hhejMGP_C3HHeJ_P0041684100100
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P0042433100100mus_musculusENSMUSP00000018184100100
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P0042433100100mus_musculus_cbajMGP_CBAJ_P0041592100100
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P004243398.928697.1429mus_pahariMGP_PahariEiJ_P004258798.928697.1429
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P004243310099.6429mus_spretusMGP_SPRETEiJ_P004103710099.6429
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P0042433100100mus_musculus_fvbnjMGP_FVBNJ_P0041717100100
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P004243399.642999.2857mus_spicilegusENSMSIP0000002002999.642999.2857
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P0042433100100mus_musculus_dba2jMGP_DBA2J_P0041745100100
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P004243395.714395.7143mus_musculus_wsbeijMGP_WSBEiJ_P004107465.206865.2068
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P0042433100100mus_musculus_casteijMGP_CASTEiJ_P0041761100100
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P0042433100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0042470100100
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P004243395.714395.7143mus_musculus_pwkphjMGP_PWKPhJ_P004134594.035194.0351
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P004243340.714340mus_musculus_nodshiltjMGP_NODShiLtJ_P004169078.620777.2414
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P0042433100100mus_musculus_akrjMGP_AKRJ_P0041919100100
MGP_C57BL6NJ_G0022568mus_musculus_c57bl6njMGP_C57BL6NJ_P004243396.428693.9286rattus_norvegicusENSRNOP0000003346296.428693.9286

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression