RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0022568 | Gene ID |
|
Accession |
- |
Symbol |
Rrp7a |
Alias |
- |
Full Name |
ribosomal RNA processing 7 homolog A (S. cerevisiae) |
Status |
Confidence |
Length |
12666 bases |
Strand |
Minus strand |
Position |
15 : 87009687 - 87022352 |
RNA binding domain |
RRM_Rrp7 , RRP7 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0042438 |
RRM_Rrp7 |
PF17799 |
1.4e-08 |
1 |
MGP_C57BL6NJ_P0042433 |
RRM_Rrp7 |
PF17799 |
2.9e-08 |
1 |
MGP_C57BL6NJ_P0042433 |
RRP7 |
PF12923 |
6.4e-35 |
2 |
MGP_C57BL6NJ_P0042437 |
RRM_Rrp7 |
PF17799 |
1.8e-07 |
1 |
MGP_C57BL6NJ_P0042435 |
RRP7 |
PF12923 |
2.6e-17 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rrp7a-001 |
MGP_C57BL6NJ_T0042433 |
4363 |
280aa |
MGP_C57BL6NJ_P0042433"/note="transcript_id=MGP_C57BL6NJ_T0042433 |
- |
MGP_C57BL6NJ_T0042435 |
486 |
50aa |
MGP_C57BL6NJ_P0042435"/note="transcript_id=MGP_C57BL6NJ_T0042435 |
- |
MGP_C57BL6NJ_T0042436 |
792 |
No protein |
- |
- |
MGP_C57BL6NJ_T0042437 |
492 |
145aa |
MGP_C57BL6NJ_P0042437"/note="transcript_id=MGP_C57BL6NJ_T0042437 |
- |
MGP_C57BL6NJ_T0042438 |
759 |
163aa |
MGP_C57BL6NJ_P0042438"/note="transcript_id=MGP_C57BL6NJ_T0042438 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0022568 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 98.9286 | 97.8571 | mus_caroli | MGP_CAROLIEiJ_P0039231 | 98.9286 | 97.8571 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 40.7143 | 40 | mus_musculus_aj | MGP_AJ_P0041957 | 78.6207 | 77.2414 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 40.7143 | 40 | mus_musculus_balbcj | MGP_BALBcJ_P0041953 | 78.6207 | 77.2414 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0041993 | 100 | 100 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0041812 | 100 | 100 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0041684 | 100 | 100 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 100 | 100 | mus_musculus | ENSMUSP00000018184 | 100 | 100 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0041592 | 100 | 100 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 98.9286 | 97.1429 | mus_pahari | MGP_PahariEiJ_P0042587 | 98.9286 | 97.1429 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 100 | 99.6429 | mus_spretus | MGP_SPRETEiJ_P0041037 | 100 | 99.6429 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0041717 | 100 | 100 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 99.6429 | 99.2857 | mus_spicilegus | ENSMSIP00000020029 | 99.6429 | 99.2857 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0041745 | 100 | 100 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 95.7143 | 95.7143 | mus_musculus_wsbeij | MGP_WSBEiJ_P0041074 | 65.2068 | 65.2068 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0041761 | 100 | 100 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0042470 | 100 | 100 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 95.7143 | 95.7143 | mus_musculus_pwkphj | MGP_PWKPhJ_P0041345 | 94.0351 | 94.0351 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 40.7143 | 40 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0041690 | 78.6207 | 77.2414 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0041919 | 100 | 100 |
MGP_C57BL6NJ_G0022568 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0042433 | 96.4286 | 93.9286 | rattus_norvegicus | ENSRNOP00000033462 | 96.4286 | 93.9286 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |