RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0020020 | Gene ID |
|
Accession |
- |
Symbol |
Taf1b |
Alias |
- |
Full Name |
TATA-box binding protein associated factor, RNA polymerase I, B |
Status |
Confidence |
Length |
62508 bases |
Strand |
Plus strand |
Position |
12 : 22857479 - 22919986 |
RNA binding domain |
zf-RRN7 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0034969 |
zf-RRN7 |
PF11781 |
4.7e-10 |
1 |
MGP_C57BL6NJ_P0034970 |
zf-RRN7 |
PF11781 |
4.7e-10 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Taf1b-201 |
MGP_C57BL6NJ_T0034969 |
2019 |
586aa |
MGP_C57BL6NJ_P0034969"/note="transcript_id=MGP_C57BL6NJ_T0034969 |
- |
MGP_C57BL6NJ_T0034970 |
1761 |
586aa |
MGP_C57BL6NJ_P0034970"/note="transcript_id=MGP_C57BL6NJ_T0034970 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0020020 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 97.7816 | 96.4164 | mus_caroli | MGP_CAROLIEiJ_P0031994 | 98.7931 | 97.4138 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 94.198 | 93.8567 | mus_musculus_aj | MGP_AJ_P0034471 | 99.639 | 99.278 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 88.5666 | 88.2253 | mus_musculus_balbcj | MGP_BALBcJ_P0034470 | 99.4253 | 99.0421 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 94.198 | 94.0273 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0034541 | 99.8192 | 99.6383 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 89.5904 | 89.5904 | mus_musculus_lpj | MGP_LPJ_P0034444 | 99.0566 | 99.0566 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 99.6587 | 99.4881 | mus_musculus_c3hhej | MGP_C3HHeJ_P0034251 | 97.9866 | 97.8188 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 100 | 100 | mus_musculus | ENSMUSP00000075339 | 100 | 100 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 32.0819 | 31.57 | mus_pahari | MGP_PahariEiJ_P0082110 | 96.9072 | 95.3608 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 94.3686 | 94.198 | mus_spretus | MGP_SPRETEiJ_P0033460 | 99.8195 | 99.639 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 99.4881 | 99.3174 | mus_musculus_fvbnj | MGP_FVBNJ_P0034299 | 97.8188 | 97.651 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 99.1468 | 98.9761 | mus_spicilegus | ENSMSIP00000031058 | 99.1468 | 98.9761 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 99.6587 | 99.4881 | mus_musculus_dba2j | MGP_DBA2J_P0034304 | 97.9866 | 97.8188 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 99.8294 | 99.6587 | mus_musculus_wsbeij | MGP_WSBEiJ_P0033719 | 99.8294 | 99.6587 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 95.3925 | 94.5392 | mus_musculus_casteij | MGP_CASTEiJ_P0034163 | 96.0481 | 95.189 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 90.273 | 89.2491 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0035016 | 98.1447 | 97.0315 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 23.2082 | 23.0375 | mus_musculus_pwkphj | MGP_PWKPhJ_P0033845 | 98.5507 | 97.8261 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 100 | 99.8294 | mus_musculus_pwkphj | MGP_PWKPhJ_P0033847 | 100 | 99.8294 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 99.6587 | 99.4881 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034307 | 97.9866 | 97.8188 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 96.7577 | 95.9044 | mus_musculus_akrj | MGP_AKRJ_P0034456 | 96.2649 | 95.416 |
MGP_C57BL6NJ_G0020020 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0034969 | 95.2218 | 90.273 | rattus_norvegicus | ENSRNOP00000090154 | 91.7763 | 87.0066 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |