Description

Ensembl ID MGP_C57BL6NJ_G0020020 Gene ID Accession -
Symbol Taf1b Alias - Full Name TATA-box binding protein associated factor, RNA polymerase I, B
Status Confidence Length 62508 bases Strand Plus strand
Position 12 : 22857479 - 22919986 RNA binding domain zf-RRN7
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C57BL6NJ_P0034969 zf-RRN7 PF11781 4.7e-10 1
MGP_C57BL6NJ_P0034970 zf-RRN7 PF11781 4.7e-10 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Taf1b-201 MGP_C57BL6NJ_T0034969 2019 586aa MGP_C57BL6NJ_P0034969"/note="transcript_id=MGP_C57BL6NJ_T0034969
- MGP_C57BL6NJ_T0034970 1761 586aa MGP_C57BL6NJ_P0034970"/note="transcript_id=MGP_C57BL6NJ_T0034970

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0020020

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496997.781696.4164mus_caroliMGP_CAROLIEiJ_P003199498.793197.4138
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496994.19893.8567mus_musculus_ajMGP_AJ_P003447199.63999.278
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496988.566688.2253mus_musculus_balbcjMGP_BALBcJ_P003447099.425399.0421
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496994.19894.0273mus_musculus_129s1svimjMGP_129S1SvImJ_P003454199.819299.6383
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496989.590489.5904mus_musculus_lpjMGP_LPJ_P003444499.056699.0566
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496999.658799.4881mus_musculus_c3hhejMGP_C3HHeJ_P003425197.986697.8188
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P0034969100100mus_musculusENSMUSP00000075339100100
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496932.081931.57mus_pahariMGP_PahariEiJ_P008211096.907295.3608
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496994.368694.198mus_spretusMGP_SPRETEiJ_P003346099.819599.639
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496999.488199.3174mus_musculus_fvbnjMGP_FVBNJ_P003429997.818897.651
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496999.146898.9761mus_spicilegusENSMSIP0000003105899.146898.9761
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496999.658799.4881mus_musculus_dba2jMGP_DBA2J_P003430497.986697.8188
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496999.829499.6587mus_musculus_wsbeijMGP_WSBEiJ_P003371999.829499.6587
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496995.392594.5392mus_musculus_casteijMGP_CASTEiJ_P003416396.048195.189
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496990.27389.2491mus_musculus_nzohlltjMGP_NZOHlLtJ_P003501698.144797.0315
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496923.208223.0375mus_musculus_pwkphjMGP_PWKPhJ_P003384598.550797.8261
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496910099.8294mus_musculus_pwkphjMGP_PWKPhJ_P003384710099.8294
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496999.658799.4881mus_musculus_nodshiltjMGP_NODShiLtJ_P003430797.986697.8188
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496996.757795.9044mus_musculus_akrjMGP_AKRJ_P003445696.264995.416
MGP_C57BL6NJ_G0020020mus_musculus_c57bl6njMGP_C57BL6NJ_P003496995.221890.273rattus_norvegicusENSRNOP0000009015491.776387.0066

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression