Welcome to
RBP World!
Description
Ensembl ID | MGP_C57BL6NJ_G0019593 | Gene ID | Accession | - | |
Symbol | Alias | - | Full Name | NA | |
Status | Confidence | Length | 5756 bases | Strand | Plus strand |
Position | 11 : 107582616 - 107588371 | RNA binding domain | Ribosomal_L27e , KOW | ||
Summary | N.A. |
RNA binding proteomes (RBPomes)
Pubmed ID | Full Name | Cell | Author | Time | Doi |
---|
Literatures on RNA binding capacity
Pubmed ID | Title | Author | Time | Journal |
---|
Transcripts
Name | Transcript ID | bp | Protein | Translation ID |
---|---|---|---|---|
- | MGP_C57BL6NJ_T0033011 | 536 | No protein | - |
- | MGP_C57BL6NJ_T0033012 | 732 | 136aa | MGP_C57BL6NJ_P0033012"/note="transcript_id=MGP_C57BL6NJ_T0033012 |
Phenotypes
ensgID | Trait | pValue | Pubmed ID |
---|
GWAS
ensgID | SNP | Chromosome | Position | Trait | PubmedID | Or or BEAT | EFO ID |
---|
Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID | Source | Target | ||||||
---|---|---|---|---|---|---|---|---|
Species | Protein ID | Perc_pos | Perc_id | Species | Protein ID | Perc_pos | Perc_id | |
MGP_C57BL6NJ_G0019593 |
Orthologs
Ensembl ID | Source | Target | ||||||
---|---|---|---|---|---|---|---|---|
Species | Protein ID | Perc_pos | Perc_id | Species | Protein ID | Perc_pos | Perc_id | |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 83.0882 | 83.0882 | mus_caroli | MGP_CAROLIEiJ_P0048674 | 95.7627 | 95.7627 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_musculus_aj | MGP_AJ_P0032510 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 74.2647 | 68.3824 | mus_musculus_balbcj | MGP_BALBcJ_P0032503 | 72.6619 | 66.9065 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 72.0588 | 66.1765 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0032569 | 70.5036 | 64.7482 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_musculus_lpj | MGP_LPJ_P0032467 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_musculus_c3hhej | MGP_C3HHeJ_P0032290 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_musculus | ENSMUSP00000102870 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_musculus_cbaj | MGP_CBAJ_P0032205 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 88.9706 | mus_pahari | MGP_PahariEiJ_P0036793 | 89.7059 | 88.9706 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_spretus | MGP_SPRETEiJ_P0031496 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_musculus_fvbnj | MGP_FVBNJ_P0032342 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_spicilegus | ENSMSIP00000030956 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 88.9706 | mus_spicilegus | ENSMSIP00000008025 | 89.7059 | 88.9706 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_musculus_dba2j | MGP_DBA2J_P0032348 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 79.4118 | 78.6765 | mus_musculus_wsbeij | MGP_WSBEiJ_P0031761 | 79.4118 | 78.6765 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_musculus_casteij | MGP_CASTEiJ_P0032099 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0033039 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 41.9118 | 38.9706 | mus_musculus_pwkphj | MGP_PWKPhJ_P0031806 | 70.3704 | 65.4321 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0032336 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | mus_musculus_akrj | MGP_AKRJ_P0032492 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 86.0294 | 85.2941 | rattus_norvegicus | ENSRNOP00000079542 | 86.0294 | 85.2941 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 89.7059 | 89.7059 | rattus_norvegicus | ENSRNOP00000028060 | 89.7059 | 89.7059 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 58.8235 | 53.6765 | rattus_norvegicus | ENSRNOP00000082623 | 76.1905 | 69.5238 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 86.7647 | 85.2941 | rattus_norvegicus | ENSRNOP00000049416 | 87.4074 | 85.9259 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 50.7353 | 44.8529 | rattus_norvegicus | ENSRNOP00000060629 | 67.6471 | 59.8039 |
MGP_C57BL6NJ_G0019593 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033012 | 88.9706 | 87.5 | rattus_norvegicus | ENSRNOP00000081613 | 88.9706 | 87.5 |
Gene Ontology
Go ID | Go term | No. evidence | Entries | Species | Category |
---|