Description

Ensembl ID MGP_C57BL6NJ_G0019302 Gene ID Accession -
Symbol Supt4a Alias - Full Name suppressor of Ty 4A
Status Confidence Length 7730 bases Strand Plus strand
Position 11 : 92083840 - 92091569 RNA binding domain Spt4
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C57BL6NJ_P0031986 Spt4 PF06093 2e-32 1
MGP_C57BL6NJ_P0031987 Spt4 PF06093 2.8e-16 1
MGP_C57BL6NJ_P0031988 Spt4 PF06093 2.9e-16 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Supt4a-001 MGP_C57BL6NJ_T0031986 707 117aa MGP_C57BL6NJ_P0031986"/note="transcript_id=MGP_C57BL6NJ_T0031986
- MGP_C57BL6NJ_T0031987 855 104aa MGP_C57BL6NJ_P0031987"/note="transcript_id=MGP_C57BL6NJ_T0031987
- MGP_C57BL6NJ_T0031988 800 87aa MGP_C57BL6NJ_P0031988"/note="transcript_id=MGP_C57BL6NJ_T0031988

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0019302

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_caroliMGP_CAROLIEiJ_P0029076100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_ajMGP_AJ_P0031477100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_balbcjMGP_BALBcJ_P0031465100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0031535100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_lpjMGP_LPJ_P003144086.666786.6667
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_c3hhejMGP_C3HHeJ_P0031268100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculusENSMUSP00000091487100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_cbajMGP_CBAJ_P003118095.901695.9016
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_pahariMGP_PahariEiJ_P0035790100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_spretusMGP_SPRETEiJ_P0030489100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_fvbnjMGP_FVBNJ_P0031313100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_spicilegusENSMSIP0000003149686.666786.6667
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_dba2jMGP_DBA2J_P0031316100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_wsbeijMGP_WSBEiJ_P0030751100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_casteijMGP_CASTEiJ_P0031027100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0032003100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_pwkphjMGP_PWKPhJ_P0030749100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0031295100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100mus_musculus_akrjMGP_AKRJ_P0031462100100
MGP_C57BL6NJ_G0019302mus_musculus_c57bl6njMGP_C57BL6NJ_P0031986100100rattus_norvegicusENSRNOP00000010448100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression