RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0019302 | Gene ID |
|
Accession |
- |
Symbol |
Supt4a |
Alias |
- |
Full Name |
suppressor of Ty 4A |
Status |
Confidence |
Length |
7730 bases |
Strand |
Plus strand |
Position |
11 : 92083840 - 92091569 |
RNA binding domain |
Spt4 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0031986 |
Spt4 |
PF06093 |
2e-32 |
1 |
MGP_C57BL6NJ_P0031987 |
Spt4 |
PF06093 |
2.8e-16 |
1 |
MGP_C57BL6NJ_P0031988 |
Spt4 |
PF06093 |
2.9e-16 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Supt4a-001 |
MGP_C57BL6NJ_T0031986 |
707 |
117aa |
MGP_C57BL6NJ_P0031986"/note="transcript_id=MGP_C57BL6NJ_T0031986 |
- |
MGP_C57BL6NJ_T0031987 |
855 |
104aa |
MGP_C57BL6NJ_P0031987"/note="transcript_id=MGP_C57BL6NJ_T0031987 |
- |
MGP_C57BL6NJ_T0031988 |
800 |
87aa |
MGP_C57BL6NJ_P0031988"/note="transcript_id=MGP_C57BL6NJ_T0031988 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0019302 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0029076 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0031477 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0031465 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0031535 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0031440 | 86.6667 | 86.6667 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0031268 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus | ENSMUSP00000091487 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0031180 | 95.9016 | 95.9016 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_pahari | MGP_PahariEiJ_P0035790 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0030489 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0031313 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_spicilegus | ENSMSIP00000031496 | 86.6667 | 86.6667 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0031316 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0030751 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0031027 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0032003 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0030749 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0031295 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0031462 | 100 | 100 |
MGP_C57BL6NJ_G0019302 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0031986 | 100 | 100 | rattus_norvegicus | ENSRNOP00000010448 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |