Description

Ensembl ID MGP_C57BL6NJ_G0018421 Gene ID Accession -
Symbol Tbrg4 Alias - Full Name transforming growth factor beta regulated gene 4
Status Confidence Length 10563 bases Strand Minus strand
Position 11 : 3857644 - 3868206 RNA binding domain RAP , FAST_2 , FAST_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C57BL6NJ_P0028461 RAP PF08373 3.5e-10 1
MGP_C57BL6NJ_P0028461 FAST_2 PF08368 2.1e-25 2
MGP_C57BL6NJ_P0028461 FAST_1 PF06743 5.2e-21 3
MGP_C57BL6NJ_P0028462 RAP PF08373 3.5e-10 1
MGP_C57BL6NJ_P0028462 FAST_2 PF08368 2.1e-25 2
MGP_C57BL6NJ_P0028462 FAST_1 PF06743 5.2e-21 3
MGP_C57BL6NJ_P0028463 RAP PF08373 3.5e-10 1
MGP_C57BL6NJ_P0028463 FAST_2 PF08368 2.1e-25 2
MGP_C57BL6NJ_P0028463 FAST_1 PF06743 5.2e-21 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tbrg4-001 MGP_C57BL6NJ_T0028461 2324 630aa MGP_C57BL6NJ_P0028461"/note="transcript_id=MGP_C57BL6NJ_T0028461
- MGP_C57BL6NJ_T0028462 2347 630aa MGP_C57BL6NJ_P0028462"/note="transcript_id=MGP_C57BL6NJ_T0028462
- MGP_C57BL6NJ_T0028463 2290 630aa MGP_C57BL6NJ_P0028463"/note="transcript_id=MGP_C57BL6NJ_T0028463
- MGP_C57BL6NJ_T0028464 2241 365aa MGP_C57BL6NJ_P0028464"/note="transcript_id=MGP_C57BL6NJ_T0028464
- MGP_C57BL6NJ_T0028465 682 No protein -
- MGP_C57BL6NJ_T0028466 582 No protein -
- MGP_C57BL6NJ_T0028467 602 No protein -
- MGP_C57BL6NJ_T0028468 652 No protein -
- MGP_C57BL6NJ_T0028469 380 No protein -
- MGP_C57BL6NJ_T0028470 647 158aa MGP_C57BL6NJ_P0028470"/note="transcript_id=MGP_C57BL6NJ_T0028470
- MGP_C57BL6NJ_T0028471 853 No protein -
- MGP_C57BL6NJ_T0028472 540 112aa MGP_C57BL6NJ_P0028472"/note="transcript_id=MGP_C57BL6NJ_T0028472

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P005558432.328116.0434mus_musculus_c57bl6njMGP_C57BL6NJ_P002846242.539721.1111
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P002066432.075514.6589mus_musculus_c57bl6njMGP_C57BL6NJ_P002846235.079416.0317
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P005813226.765813.1351mus_musculus_c57bl6njMGP_C57BL6NJ_P002846234.285716.8254
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P003794134.039318.003mus_musculus_c57bl6njMGP_C57BL6NJ_P002846235.714318.8889
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P007093533.761517.7982mus_musculus_c57bl6njMGP_C57BL6NJ_P002846229.206315.3968

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P002846299.047698.254mus_caroliMGP_CAROLIEiJ_P002563299.047698.254
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_ajMGP_AJ_P0027985100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_balbcjMGP_BALBcJ_P0027965100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0028016100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_lpjMGP_LPJ_P0027933100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_c3hhejMGP_C3HHeJ_P0027761100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculusENSMUSP00000140835100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_cbajMGP_CBAJ_P0027690100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P002846298.571497.4603mus_pahariMGP_PahariEiJ_P003030998.728197.6153
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P002846299.841399.6825mus_spretusMGP_SPRETEiJ_P002696999.841399.6825
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_fvbnjMGP_FVBNJ_P0027806100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P002846299.682598.8889mus_spicilegusENSMSIP0000002729599.682598.8889
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_dba2jMGP_DBA2J_P0027817100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_wsbeijMGP_WSBEiJ_P0027272100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_casteijMGP_CASTEiJ_P0027369100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0028491100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_pwkphjMGP_PWKPhJ_P0027065100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0027788100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P0028462100100mus_musculus_akrjMGP_AKRJ_P0027945100100
MGP_C57BL6NJ_G0018421mus_musculus_c57bl6njMGP_C57BL6NJ_P002846296.507992.5397rattus_norvegicusENSRNOP0000007422396.661492.6868

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression