Description

Ensembl ID MGP_C57BL6NJ_G0018005 Gene ID Accession -
Symbol Rtcb Alias - Full Name RNA 2',3'-cyclic phosphate and 5'-OH ligase
Status Confidence Length 23733 bases Strand Minus strand
Position 10 : 89836527 - 89860259 RNA binding domain RtcB
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C57BL6NJ_P0027118 RtcB PF01139 1.1e-145 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rtcb-001 MGP_C57BL6NJ_T0027118 2009 505aa MGP_C57BL6NJ_P0027118"/note="transcript_id=MGP_C57BL6NJ_T0027118
- MGP_C57BL6NJ_T0027119 992 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0018005

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_caroliMGP_CAROLIEiJ_P002434199.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_ajMGP_AJ_P002664299.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_balbcjMGP_BALBcJ_P002661599.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_129s1svimjMGP_129S1SvImJ_P002667199.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_lpjMGP_LPJ_P002658399.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P0027118100100mus_musculus_c3hhejMGP_C3HHeJ_P0026419100100
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculusENSMUSP0000000183499.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_cbajMGP_CBAJ_P002634699.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_pahariMGP_PahariEiJ_P008832399.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_spretusMGP_SPRETEiJ_P002552599.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_fvbnjMGP_FVBNJ_P002646699.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_spicilegusENSMSIP0000003263799.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_dba2jMGP_DBA2J_P002647199.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_wsbeijMGP_WSBEiJ_P002594499.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_casteijMGP_CASTEiJ_P002599799.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_nzohlltjMGP_NZOHlLtJ_P002714599.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_pwkphjMGP_PWKPhJ_P002570299.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_nodshiltjMGP_NODShiLtJ_P002646499.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711899.80299.802mus_musculus_akrjMGP_AKRJ_P002660999.80299.802
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711896.831795.8416rattus_norvegicusENSRNOP0000009366596.831795.8416
MGP_C57BL6NJ_G0018005mus_musculus_c57bl6njMGP_C57BL6NJ_P002711879.80279.4059rattus_norvegicusENSRNOP0000007641997.108496.6265

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression