RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C57BL6NJ_G0018005 | Gene ID |
|
Accession |
- |
Symbol |
Rtcb |
Alias |
- |
Full Name |
RNA 2',3'-cyclic phosphate and 5'-OH ligase |
Status |
Confidence |
Length |
23733 bases |
Strand |
Minus strand |
Position |
10 : 89836527 - 89860259 |
RNA binding domain |
RtcB |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C57BL6NJ_P0027118 |
RtcB |
PF01139 |
1.1e-145 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rtcb-001 |
MGP_C57BL6NJ_T0027118 |
2009 |
505aa |
MGP_C57BL6NJ_P0027118"/note="transcript_id=MGP_C57BL6NJ_T0027118 |
- |
MGP_C57BL6NJ_T0027119 |
992 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0018005 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_caroli | MGP_CAROLIEiJ_P0024341 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_aj | MGP_AJ_P0026642 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_balbcj | MGP_BALBcJ_P0026615 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0026671 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_lpj | MGP_LPJ_P0026583 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0026419 | 100 | 100 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus | ENSMUSP00000001834 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_cbaj | MGP_CBAJ_P0026346 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_pahari | MGP_PahariEiJ_P0088323 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_spretus | MGP_SPRETEiJ_P0025525 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_fvbnj | MGP_FVBNJ_P0026466 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_spicilegus | ENSMSIP00000032637 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_dba2j | MGP_DBA2J_P0026471 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_wsbeij | MGP_WSBEiJ_P0025944 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_casteij | MGP_CASTEiJ_P0025997 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0027145 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_pwkphj | MGP_PWKPhJ_P0025702 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0026464 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 99.802 | 99.802 | mus_musculus_akrj | MGP_AKRJ_P0026609 | 99.802 | 99.802 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 96.8317 | 95.8416 | rattus_norvegicus | ENSRNOP00000093665 | 96.8317 | 95.8416 |
MGP_C57BL6NJ_G0018005 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027118 | 79.802 | 79.4059 | rattus_norvegicus | ENSRNOP00000076419 | 97.1084 | 96.6265 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |