Description

Ensembl ID MGP_C3HHeJ_G0034665 Gene ID Accession -
Symbol Rps27l Alias - Full Name ribosomal protein S27-like
Status Confidence Length 4428 bases Strand Plus strand
Position 9 : 66585798 - 66590225 RNA binding domain Ribosomal_S27e
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0092534 Ribosomal_S27e PF01667 3.5e-30 1
MGP_C3HHeJ_P0092536 Ribosomal_S27e PF01667 9.7e-28 1
MGP_C3HHeJ_P0092535 Ribosomal_S27e PF01667 2.7e-27 1
MGP_C3HHeJ_P0092538 Ribosomal_S27e PF01667 2.4e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rps27l-001 MGP_C3HHeJ_T0092534 499 84aa MGP_C3HHeJ_P0092534"/note="transcript_id=MGP_C3HHeJ_T0092534
- MGP_C3HHeJ_T0092535 575 105aa MGP_C3HHeJ_P0092535"/note="transcript_id=MGP_C3HHeJ_T0092535
- MGP_C3HHeJ_T0092536 452 77aa MGP_C3HHeJ_P0092536"/note="transcript_id=MGP_C3HHeJ_T0092536
- MGP_C3HHeJ_T0092537 566 No protein -
- MGP_C3HHeJ_T0092538 271 32aa MGP_C3HHeJ_P0092538"/note="transcript_id=MGP_C3HHeJ_T0092538
- MGP_C3HHeJ_T0092539 338 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P006165690.476286.9048mus_musculus_c3hhejMGP_C3HHeJ_P009253572.38169.5238

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0092954100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P009253572.38169.5238mus_caroliMGP_CAROLIEiJ_P005879590.476286.9048
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_ajMGP_AJ_P0093037100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_balbcjMGP_BALBcJ_P0092960100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_pwkphjMGP_PWKPhJ_P0092565100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_wsbeijMGP_WSBEiJ_P0091551100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P009253571.428665.7143rattus_norvegicusENSRNOP0000008749364.102658.9744
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P009253572.38171.4286rattus_norvegicusENSRNOP0000008265167.857166.9643
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0093481100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P009253510099.0476mus_spretusMGP_SPRETEiJ_P009207310099.0476
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P009253573.333373.3333mus_spicilegusENSMSIP0000000776998.717998.7179
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P009253579.047675.2381mus_spicilegusENSMSIP0000002650763.358860.3053
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_dba2jMGP_DBA2J_P0092671100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_akrjMGP_AKRJ_P0092982100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P009253573.333372.381mus_pahariMGP_PahariEiJ_P002408691.666790.4762
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_lpjMGP_LPJ_P0092681100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_fvbnjMGP_FVBNJ_P0092519100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0092517100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0093794100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_casteijMGP_CASTEiJ_P0093146100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculus_cbajMGP_CBAJ_P0092462100100
MGP_C3HHeJ_G0034665mus_musculus_c3hhejMGP_C3HHeJ_P0092535100100mus_musculusENSMUSP00000120518100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression