RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C3HHeJ_G0034665 | Gene ID |
|
Accession |
- |
Symbol |
Rps27l |
Alias |
- |
Full Name |
ribosomal protein S27-like |
Status |
Confidence |
Length |
4428 bases |
Strand |
Plus strand |
Position |
9 : 66585798 - 66590225 |
RNA binding domain |
Ribosomal_S27e |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C3HHeJ_P0092534 |
Ribosomal_S27e |
PF01667 |
3.5e-30 |
1 |
MGP_C3HHeJ_P0092536 |
Ribosomal_S27e |
PF01667 |
9.7e-28 |
1 |
MGP_C3HHeJ_P0092535 |
Ribosomal_S27e |
PF01667 |
2.7e-27 |
1 |
MGP_C3HHeJ_P0092538 |
Ribosomal_S27e |
PF01667 |
2.4e-07 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rps27l-001 |
MGP_C3HHeJ_T0092534 |
499 |
84aa |
MGP_C3HHeJ_P0092534"/note="transcript_id=MGP_C3HHeJ_T0092534 |
- |
MGP_C3HHeJ_T0092535 |
575 |
105aa |
MGP_C3HHeJ_P0092535"/note="transcript_id=MGP_C3HHeJ_T0092535 |
- |
MGP_C3HHeJ_T0092536 |
452 |
77aa |
MGP_C3HHeJ_P0092536"/note="transcript_id=MGP_C3HHeJ_T0092536 |
- |
MGP_C3HHeJ_T0092537 |
566 |
No protein |
- |
- |
MGP_C3HHeJ_T0092538 |
271 |
32aa |
MGP_C3HHeJ_P0092538"/note="transcript_id=MGP_C3HHeJ_T0092538 |
- |
MGP_C3HHeJ_T0092539 |
338 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0061656 | 90.4762 | 86.9048 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 72.381 | 69.5238 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0092954 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 72.381 | 69.5238 | mus_caroli | MGP_CAROLIEiJ_P0058795 | 90.4762 | 86.9048 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0093037 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0092960 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0092565 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0091551 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 71.4286 | 65.7143 | rattus_norvegicus | ENSRNOP00000087493 | 64.1026 | 58.9744 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 72.381 | 71.4286 | rattus_norvegicus | ENSRNOP00000082651 | 67.8571 | 66.9643 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0093481 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 99.0476 | mus_spretus | MGP_SPRETEiJ_P0092073 | 100 | 99.0476 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 73.3333 | 73.3333 | mus_spicilegus | ENSMSIP00000007769 | 98.7179 | 98.7179 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 79.0476 | 75.2381 | mus_spicilegus | ENSMSIP00000026507 | 63.3588 | 60.3053 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0092671 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0092982 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 73.3333 | 72.381 | mus_pahari | MGP_PahariEiJ_P0024086 | 91.6667 | 90.4762 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0092681 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0092519 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0092517 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0093794 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0093146 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0092462 | 100 | 100 |
MGP_C3HHeJ_G0034665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0092535 | 100 | 100 | mus_musculus | ENSMUSP00000120518 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |