Description

Ensembl ID MGP_C3HHeJ_G0030633 Gene ID Accession -
Symbol Trnt1 Alias - Full Name tRNA nucleotidyl transferase, CCA-adding, 1
Status Confidence Length 13355 bases Strand Minus strand
Position 6 : 76653732 - 76667086 RNA binding domain PolyA_pol
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0078122 PolyA_pol PF01743 4.7e-34 1
MGP_C3HHeJ_P0078119 PolyA_pol PF01743 1.9e-33 1
MGP_C3HHeJ_P0078120 PolyA_pol PF01743 1.9e-33 1
MGP_C3HHeJ_P0078121 PolyA_pol PF01743 1.9e-33 1
MGP_C3HHeJ_P0078123 PolyA_pol PF01743 8.1e-17 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Trnt1-001 MGP_C3HHeJ_T0078119 2283 434aa MGP_C3HHeJ_P0078119"/note="transcript_id=MGP_C3HHeJ_T0078119
- MGP_C3HHeJ_T0078120 1614 434aa MGP_C3HHeJ_P0078120"/note="transcript_id=MGP_C3HHeJ_T0078120
- MGP_C3HHeJ_T0078121 1398 434aa MGP_C3HHeJ_P0078121"/note="transcript_id=MGP_C3HHeJ_T0078121
- MGP_C3HHeJ_T0078122 1934 215aa MGP_C3HHeJ_P0078122"/note="transcript_id=MGP_C3HHeJ_T0078122
- MGP_C3HHeJ_T0078123 476 133aa MGP_C3HHeJ_P0078123"/note="transcript_id=MGP_C3HHeJ_T0078123
- MGP_C3HHeJ_T0078124 785 71aa MGP_C3HHeJ_P0078124"/note="transcript_id=MGP_C3HHeJ_T0078124
- MGP_C3HHeJ_T0078125 369 No protein -
- MGP_C3HHeJ_T0078126 357 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0030633

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P0078119100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0079163100100
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P007811910099.5392mus_caroliMGP_CAROLIEiJ_P007526010099.5392
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P0078119100100mus_musculus_ajMGP_AJ_P0079235100100
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P0078119100100mus_musculus_balbcjMGP_BALBcJ_P0079176100100
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P007811910099.7696mus_musculus_pwkphjMGP_PWKPhJ_P007880610099.7696
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P0078119100100mus_musculus_wsbeijMGP_WSBEiJ_P0077905100100
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P007811998.847997.235rattus_norvegicusENSRNOP0000008032094.70293.1567
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P007811998.617596.7742rattus_norvegicusENSRNOP0000008033898.617596.7742
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P0078119100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0079648100100
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P007811999.769699.5392mus_spretusMGP_SPRETEiJ_P007832699.769699.5392
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P007811910099.7696mus_spicilegusENSMSIP0000002810810099.7696
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P0078119100100mus_musculus_dba2jMGP_DBA2J_P0078913100100
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P0078119100100mus_musculus_akrjMGP_AKRJ_P0079158100100
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P007811999.308898.1567mus_pahariMGP_PahariEiJ_P005145999.308898.1567
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P0078119100100mus_musculus_lpjMGP_LPJ_P0078945100100
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P0078119100100mus_musculus_fvbnjMGP_FVBNJ_P0078796100100
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P007811910099.7696mus_musculus_nodshiltjMGP_NODShiLtJ_P007880110099.7696
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P0078119100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0079898100100
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P007811910099.7696mus_musculus_casteijMGP_CASTEiJ_P007937910099.7696
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P0078119100100mus_musculus_cbajMGP_CBAJ_P0078760100100
MGP_C3HHeJ_G0030633mus_musculus_c3hhejMGP_C3HHeJ_P0078119100100mus_musculusENSMUSP00000060900100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression