RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C3HHeJ_G0030633 | Gene ID |
|
Accession |
- |
Symbol |
Trnt1 |
Alias |
- |
Full Name |
tRNA nucleotidyl transferase, CCA-adding, 1 |
Status |
Confidence |
Length |
13355 bases |
Strand |
Minus strand |
Position |
6 : 76653732 - 76667086 |
RNA binding domain |
PolyA_pol |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C3HHeJ_P0078122 |
PolyA_pol |
PF01743 |
4.7e-34 |
1 |
MGP_C3HHeJ_P0078119 |
PolyA_pol |
PF01743 |
1.9e-33 |
1 |
MGP_C3HHeJ_P0078120 |
PolyA_pol |
PF01743 |
1.9e-33 |
1 |
MGP_C3HHeJ_P0078121 |
PolyA_pol |
PF01743 |
1.9e-33 |
1 |
MGP_C3HHeJ_P0078123 |
PolyA_pol |
PF01743 |
8.1e-17 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Trnt1-001 |
MGP_C3HHeJ_T0078119 |
2283 |
434aa |
MGP_C3HHeJ_P0078119"/note="transcript_id=MGP_C3HHeJ_T0078119 |
- |
MGP_C3HHeJ_T0078120 |
1614 |
434aa |
MGP_C3HHeJ_P0078120"/note="transcript_id=MGP_C3HHeJ_T0078120 |
- |
MGP_C3HHeJ_T0078121 |
1398 |
434aa |
MGP_C3HHeJ_P0078121"/note="transcript_id=MGP_C3HHeJ_T0078121 |
- |
MGP_C3HHeJ_T0078122 |
1934 |
215aa |
MGP_C3HHeJ_P0078122"/note="transcript_id=MGP_C3HHeJ_T0078122 |
- |
MGP_C3HHeJ_T0078123 |
476 |
133aa |
MGP_C3HHeJ_P0078123"/note="transcript_id=MGP_C3HHeJ_T0078123 |
- |
MGP_C3HHeJ_T0078124 |
785 |
71aa |
MGP_C3HHeJ_P0078124"/note="transcript_id=MGP_C3HHeJ_T0078124 |
- |
MGP_C3HHeJ_T0078125 |
369 |
No protein |
- |
- |
MGP_C3HHeJ_T0078126 |
357 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0030633 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079163 | 100 | 100 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 99.5392 | mus_caroli | MGP_CAROLIEiJ_P0075260 | 100 | 99.5392 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0079235 | 100 | 100 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0079176 | 100 | 100 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 99.7696 | mus_musculus_pwkphj | MGP_PWKPhJ_P0078806 | 100 | 99.7696 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0077905 | 100 | 100 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 98.8479 | 97.235 | rattus_norvegicus | ENSRNOP00000080320 | 94.702 | 93.1567 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 98.6175 | 96.7742 | rattus_norvegicus | ENSRNOP00000080338 | 98.6175 | 96.7742 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0079648 | 100 | 100 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 99.7696 | 99.5392 | mus_spretus | MGP_SPRETEiJ_P0078326 | 99.7696 | 99.5392 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 99.7696 | mus_spicilegus | ENSMSIP00000028108 | 100 | 99.7696 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0078913 | 100 | 100 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0079158 | 100 | 100 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 99.3088 | 98.1567 | mus_pahari | MGP_PahariEiJ_P0051459 | 99.3088 | 98.1567 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0078945 | 100 | 100 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0078796 | 100 | 100 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 99.7696 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0078801 | 100 | 99.7696 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0079898 | 100 | 100 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 99.7696 | mus_musculus_casteij | MGP_CASTEiJ_P0079379 | 100 | 99.7696 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0078760 | 100 | 100 |
MGP_C3HHeJ_G0030633 | mus_musculus_c3hhej | MGP_C3HHeJ_P0078119 | 100 | 100 | mus_musculus | ENSMUSP00000060900 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |