Description

Ensembl ID MGP_C3HHeJ_G0029502 Gene ID Accession -
Symbol Aff1 Alias - Full Name AF4/FMR2 family, member 1
Status Confidence Length 109199 bases Strand Plus strand
Position 5 : 105122994 - 105232192 RNA binding domain AF-4
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0072572 AF-4 PF05110 4.1e-181 1
MGP_C3HHeJ_P0072571 AF-4 PF05110 9.3e-181 1
MGP_C3HHeJ_P0072573 AF-4 PF05110 9.5e-181 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Aff1-003 MGP_C3HHeJ_T0072570 1613 No protein -
- MGP_C3HHeJ_T0072571 8324 1218aa MGP_C3HHeJ_P0072571"/note="transcript_id=MGP_C3HHeJ_T0072571
- MGP_C3HHeJ_T0072572 2753 870aa MGP_C3HHeJ_P0072572"/note="transcript_id=MGP_C3HHeJ_T0072572
- MGP_C3HHeJ_T0072573 8313 1226aa MGP_C3HHeJ_P0072573"/note="transcript_id=MGP_C3HHeJ_T0072573
- MGP_C3HHeJ_T0072574 686 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P001923747.518332.4654mus_musculus_c3hhejMGP_C3HHeJ_P007257347.634632.5449
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P002876952.06936.2931mus_musculus_c3hhejMGP_C3HHeJ_P007257349.265934.3393
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P009582543.710729.0094mus_musculus_c3hhejMGP_C3HHeJ_P007257345.350730.0979

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.918499.9184mus_musculus_129s1svimjMGP_129S1SvImJ_P007292199.918499.9184
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257398.205597.1452mus_caroliMGP_CAROLIEiJ_P006939998.045696.987
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.918499.9184mus_musculus_ajMGP_AJ_P007299299.918499.9184
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.918499.9184mus_musculus_balbcjMGP_BALBcJ_P007292399.918499.9184
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.510699.429mus_musculus_pwkphjMGP_PWKPhJ_P007258799.510699.429
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.836999.8369mus_musculus_wsbeijMGP_WSBEiJ_P007172299.836999.8369
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257388.825484.5024rattus_norvegicusENSRNOP0000006238989.043384.7097
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.918499.9184mus_musculus_c57bl6njMGP_C57BL6NJ_P007340099.918499.9184
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.021298.6134mus_spretusMGP_SPRETEiJ_P007206499.345398.9362
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257398.368797.8793mus_spicilegusENSMSIP0000000649495.942795.4654
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.918499.9184mus_musculus_dba2jMGP_DBA2J_P007266099.918499.9184
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.918499.9184mus_musculus_akrjMGP_AKRJ_P007291999.918499.9184
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257395.758694.1272mus_pahariMGP_PahariEiJ_P003255695.993594.3581
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.918499.9184mus_musculus_lpjMGP_LPJ_P007271599.918499.9184
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P0072573100100mus_musculus_fvbnjMGP_FVBNJ_P0072568100100
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.918499.9184mus_musculus_nodshiltjMGP_NODShiLtJ_P007256999.918499.9184
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.918499.9184mus_musculus_nzohlltjMGP_NZOHlLtJ_P007361199.918499.9184
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.347599.1843mus_musculus_casteijMGP_CASTEiJ_P007312299.347599.1843
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P0072573100100mus_musculus_cbajMGP_CBAJ_P0072529100100
MGP_C3HHeJ_G0029502mus_musculus_c3hhejMGP_C3HHeJ_P007257399.918499.9184mus_musculusENSMUSP0000003125699.918499.9184

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression