RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C3HHeJ_G0029358 | Gene ID |
|
Accession |
- |
Symbol |
Polr2b |
Alias |
- |
Full Name |
polymerase (RNA) II (DNA directed) polypeptide B |
Status |
Confidence |
Length |
41944 bases |
Strand |
Plus strand |
Position |
5 : 77394104 - 77436047 |
RNA binding domain |
RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C3HHeJ_P0071958 |
RNA_pol_Rpb2_1 |
PF04563 |
8.3e-68 |
1 |
MGP_C3HHeJ_P0071958 |
RNA_pol_Rpb2_3 |
PF04565 |
1.1e-23 |
2 |
MGP_C3HHeJ_P0071958 |
RNA_pol_Rpb2_7 |
PF04560 |
9.3e-34 |
3 |
MGP_C3HHeJ_P0071958 |
RNA_pol_Rpb2_2 |
PF04561 |
8.6e-56 |
4 |
MGP_C3HHeJ_P0071958 |
RNA_pol_Rpb2_6 |
PF00562 |
4.7e-128 |
5 |
MGP_C3HHeJ_P0071958 |
RNA_pol_Rpb2_4 |
PF04566 |
2.9e-24 |
6 |
MGP_C3HHeJ_P0071958 |
RNA_pol_Rpb2_5 |
PF04567 |
2.2e-16 |
7 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Polr2b-001 |
MGP_C3HHeJ_T0071958 |
4145 |
1174aa |
MGP_C3HHeJ_P0071958"/note="transcript_id=MGP_C3HHeJ_T0071958 |
- |
MGP_C3HHeJ_T0071959 |
261 |
No protein |
- |
- |
MGP_C3HHeJ_T0071960 |
737 |
No protein |
- |
- |
MGP_C3HHeJ_T0071961 |
509 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0026387 | 60.5472 | 39.0115 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 58.4327 | 37.6491 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0057243 | 46.1674 | 30.3965 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 44.6337 | 29.3867 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0072302 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 99.9148 | mus_caroli | MGP_CAROLIEiJ_P0068793 | 100 | 99.9148 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0072385 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0072315 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0071977 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0071105 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 99.9148 | rattus_norvegicus | ENSRNOP00000030781 | 100 | 99.9148 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0072779 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0071447 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_spicilegus | ENSMSIP00000024197 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0072048 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0072303 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 99.9148 | mus_pahari | MGP_PahariEiJ_P0031973 | 100 | 99.9148 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0072097 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0071949 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0071973 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0072989 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0072510 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0071909 | 100 | 100 |
MGP_C3HHeJ_G0029358 | mus_musculus_c3hhej | MGP_C3HHeJ_P0071958 | 100 | 100 | mus_musculus | ENSMUSP00000031167 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |