RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_C3HHeJ_G0029128	Gene ID		Accession	-
Symbol	Mrpl33	Alias	-	Full Name	mitochondrial ribosomal protein L33
Status	Confidence	Length	52327 bases	Strand	Plus strand
Position	5 : 29860910 - 29913236	RNA binding domain	Ribosomal_L33
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
MGP_C3HHeJ_P0070591	Ribosomal_L33	PF00471	1.6e-05	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Mrpl33-006	MGP_C3HHeJ_T0070589	2045	No protein	-
-	MGP_C3HHeJ_T0070590	367	No protein	-
-	MGP_C3HHeJ_T0070591	478	65aa	MGP_C3HHeJ_P0070591"/note="transcript_id=MGP_C3HHeJ_T0070591
-	MGP_C3HHeJ_T0070592	360	No protein	-
-	MGP_C3HHeJ_T0070593	839	No protein	-
-	MGP_C3HHeJ_T0070594	2178	107aa	MGP_C3HHeJ_P0070594"/note="transcript_id=MGP_C3HHeJ_T0070594
-	MGP_C3HHeJ_T0070595	2741	No protein	-
-	MGP_C3HHeJ_T0070596	638	No protein	-
-	MGP_C3HHeJ_T0070597	773	No protein	-
-	MGP_C3HHeJ_T0070600	526	No protein	-
-	MGP_C3HHeJ_T0070601	842	No protein	-

Gene Model

Click here to download MGP_C3HHeJ_G0029128's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MGP_C3HHeJ_G0029128's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_C3HHeJ_G0029128

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_aj	MGP_AJ_P0071020	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_balbcj	MGP_BALBcJ_P0070945	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_pwkphj	MGP_PWKPhJ_P0070596	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_wsbeij	MGP_WSBEiJ_P0069748	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	90.7692	84.6154	rattus_norvegicus	ENSRNOP00000033059	42.446	39.5683
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_c57bl6nj	MGP_C57BL6NJ_P0071425	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_spicilegus	ENSMSIP00000023717	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_dba2j	MGP_DBA2J_P0070668	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_akrj	MGP_AKRJ_P0070921	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_lpj	MGP_LPJ_P0070741	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_fvbnj	MGP_FVBNJ_P0070578	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_nodshiltj	MGP_NODShiLtJ_P0070603	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_nzohlltj	MGP_NZOHlLtJ_P0071622	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_casteij	MGP_CASTEiJ_P0071128	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus_cbaj	MGP_CBAJ_P0070531	100	100
MGP_C3HHeJ_G0029128	mus_musculus_c3hhej	MGP_C3HHeJ_P0070591	100	100	mus_musculus	ENSMUSP00000031024	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression