Description

Ensembl ID MGP_C3HHeJ_G0027850 Gene ID Accession -
Symbol Nfx1 Alias - Full Name nuclear transcription factor, X-box binding 1
Status Confidence Length 55120 bases Strand Plus strand
Position 4 : 38913528 - 38968647 RNA binding domain R3H
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0064727 R3H PF01424 7.6e-19 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Nfx1-001 MGP_C3HHeJ_T0064727 4594 1114aa MGP_C3HHeJ_P0064727"/note="transcript_id=MGP_C3HHeJ_T0064727
- MGP_C3HHeJ_T0064728 3617 804aa MGP_C3HHeJ_P0064728"/note="transcript_id=MGP_C3HHeJ_T0064728
- MGP_C3HHeJ_T0064729 4349 818aa MGP_C3HHeJ_P0064729"/note="transcript_id=MGP_C3HHeJ_T0064729
- MGP_C3HHeJ_T0064730 1009 No protein -
- MGP_C3HHeJ_T0064731 1316 No protein -
- MGP_C3HHeJ_T0064732 859 No protein -
- MGP_C3HHeJ_T0064733 623 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P007169741.847830.6522mus_musculus_c3hhejMGP_C3HHeJ_P006472734.560125.3142

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0065088100100
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P006472799.192198.5637mus_caroliMGP_CAROLIEiJ_P006181499.192198.5637
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculus_ajMGP_AJ_P0065120100100
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculus_balbcjMGP_BALBcJ_P0065040100100
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P006472766.247865.7989mus_musculus_pwkphjMGP_PWKPhJ_P006460498.531497.8638
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculus_wsbeijMGP_WSBEiJ_P0063980100100
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P006472798.025196.3196rattus_norvegicusENSRNOP0000005742398.025196.3196
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0065526100100
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P006472799.461499.3716mus_spretusMGP_SPRETEiJ_P006424799.461499.3716
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P006472799.640999.3716mus_spicilegusENSMSIP0000000766699.640999.3716
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculus_dba2jMGP_DBA2J_P0064801100100
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculus_akrjMGP_AKRJ_P0065059100100
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P006472798.83397.4865mus_pahariMGP_PahariEiJ_P005747698.83397.4865
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculus_lpjMGP_LPJ_P0064934100100
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculus_fvbnjMGP_FVBNJ_P0064751100100
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0064753100100
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0065745100100
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P006472799.910299.9102mus_musculus_casteijMGP_CASTEiJ_P006508099.910299.9102
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculus_cbajMGP_CBAJ_P0064678100100
MGP_C3HHeJ_G0027850mus_musculus_c3hhejMGP_C3HHeJ_P0064727100100mus_musculusENSMUSP00000095747100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression