Description

Ensembl ID MGP_C3HHeJ_G0026152 Gene ID Accession -
Symbol Secisbp2l Alias - Full Name SECIS binding protein 2-like
Status Confidence Length 47126 bases Strand Minus strand
Position 2 : 127707578 - 127754703 RNA binding domain Ribosomal_L7Ae
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0057038 Ribosomal_L7Ae PF01248 7.6e-22 1
MGP_C3HHeJ_P0057037 Ribosomal_L7Ae PF01248 2.8e-21 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Secisbp2l-001 MGP_C3HHeJ_T0057037 6795 1089aa MGP_C3HHeJ_P0057037"/note="transcript_id=MGP_C3HHeJ_T0057037
- MGP_C3HHeJ_T0057038 2321 427aa MGP_C3HHeJ_P0057038"/note="transcript_id=MGP_C3HHeJ_T0057038
- MGP_C3HHeJ_T0057039 600 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P003671550.116633.3333mus_musculus_c3hhejMGP_C3HHeJ_P005703739.485826.2626

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.816399.8163mus_musculus_129s1svimjMGP_129S1SvImJ_P005737499.816399.8163
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.081798.6226mus_caroliMGP_CAROLIEiJ_P005432199.081798.6226
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.816399.8163mus_musculus_ajMGP_AJ_P005740699.816399.8163
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.816399.8163mus_musculus_balbcjMGP_BALBcJ_P005734399.816399.8163
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.816399.8163mus_musculus_pwkphjMGP_PWKPhJ_P005686099.816399.8163
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.357299.1736mus_musculus_wsbeijMGP_WSBEiJ_P005633799.815599.631
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703796.051494.3985rattus_norvegicusENSRNOP0000001155195.699994.0531
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.816399.8163mus_musculus_c57bl6njMGP_C57BL6NJ_P005781799.816399.8163
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.632799.3572mus_spretusMGP_SPRETEiJ_P005642699.632799.3572
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.724599.6327mus_spicilegusENSMSIP0000000643999.724599.6327
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P0057037100100mus_musculus_dba2jMGP_DBA2J_P0057105100100
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.816399.8163mus_musculus_akrjMGP_AKRJ_P005735299.816399.8163
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703798.530897.5207mus_pahariMGP_PahariEiJ_P006530798.530897.5207
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.816399.8163mus_musculus_lpjMGP_LPJ_P005724099.816399.8163
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.816399.8163mus_musculus_fvbnjMGP_FVBNJ_P005707999.816399.8163
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.816399.8163mus_musculus_nodshiltjMGP_NODShiLtJ_P005705699.816399.8163
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.816399.8163mus_musculus_nzohlltjMGP_NZOHlLtJ_P005798299.816399.8163
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.908299.9082mus_musculus_casteijMGP_CASTEiJ_P005727499.908299.9082
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P0057037100100mus_musculus_cbajMGP_CBAJ_P0057007100100
MGP_C3HHeJ_G0026152mus_musculus_c3hhejMGP_C3HHeJ_P005703799.816399.8163mus_musculusENSMUSP0000005577299.816399.8163

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression