RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_C3HHeJ_G0022616	Gene ID		Accession	-
Symbol	Trmt10c	Alias	-	Full Name	tRNA methyltransferase 10C
Status	Confidence	Length	5211 bases	Strand	Minus strand
Position	16 : 54622077 - 54627287	RNA binding domain	tRNA_m1G_MT
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
MGP_C3HHeJ_P0044387	tRNA_m1G_MT	PF01746	9.1e-44	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Trmt10c-001	MGP_C3HHeJ_T0044387	3002	414aa	MGP_C3HHeJ_P0044387"/note="transcript_id=MGP_C3HHeJ_T0044387

Gene Model

Click here to download MGP_C3HHeJ_G0022616's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MGP_C3HHeJ_G0022616's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_C3HHeJ_G0022616

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_C3HHeJ_G0022616

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression