RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C3HHeJ_G0022264 | Gene ID |
|
Accession |
- |
Symbol |
Parn |
Alias |
- |
Full Name |
poly(A)-specific ribonuclease (deadenylation nuclease) |
Status |
Confidence |
Length |
140901 bases |
Strand |
Minus strand |
Position |
16 : 10455846 - 10596746 |
RNA binding domain |
RNA_bind , CAF1 , R3H |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C3HHeJ_P0042911 |
RNA_bind |
PF08675 |
2.3e-33 |
1 |
MGP_C3HHeJ_P0042911 |
CAF1 |
PF04857 |
8.2e-86 |
2 |
MGP_C3HHeJ_P0042911 |
R3H |
PF01424 |
5.2e-07 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Parn-201 |
MGP_C3HHeJ_T0042911 |
2902 |
624aa |
MGP_C3HHeJ_P0042911"/note="transcript_id=MGP_C3HHeJ_T0042911 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0045253 | 47.4576 | 27.4953 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 40.3846 | 23.3974 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0066863 | 35.6164 | 18.7867 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 29.1667 | 15.3846 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.5192 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0043216 | 99.8397 | 99.5192 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.1987 | mus_caroli | MGP_CAROLIEiJ_P0040424 | 99.8397 | 99.1987 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.5192 | mus_musculus_aj | MGP_AJ_P0043186 | 99.8397 | 99.5192 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.6795 | mus_musculus_balbcj | MGP_BALBcJ_P0043169 | 99.8397 | 99.6795 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.6795 | mus_musculus_pwkphj | MGP_PWKPhJ_P0042599 | 99.8397 | 99.6795 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 100 | 99.6795 | mus_musculus_wsbeij | MGP_WSBEiJ_P0042296 | 100 | 99.6795 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 87.0192 | 85.4167 | rattus_norvegicus | ENSRNOP00000072539 | 84.186 | 82.6357 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.5192 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0043654 | 99.8397 | 99.5192 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.6795 | 99.1987 | mus_spretus | MGP_SPRETEiJ_P0042277 | 99.6795 | 99.1987 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 98.8782 | 98.2372 | mus_spicilegus | ENSMSIP00000025655 | 71.9953 | 71.5286 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0042980 | 100 | 100 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.5192 | mus_musculus_akrj | MGP_AKRJ_P0043159 | 99.8397 | 99.5192 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 97.7564 | 96.6346 | mus_pahari | MGP_PahariEiJ_P0027821 | 97.7564 | 96.6346 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.5192 | mus_musculus_lpj | MGP_LPJ_P0043044 | 99.8397 | 99.5192 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.5192 | mus_musculus_fvbnj | MGP_FVBNJ_P0042933 | 99.8397 | 99.5192 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.5192 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0042916 | 99.8397 | 99.5192 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.5192 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0043696 | 99.8397 | 99.5192 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.5192 | mus_musculus_casteij | MGP_CASTEiJ_P0043012 | 99.8397 | 99.5192 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0042822 | 100 | 100 |
MGP_C3HHeJ_G0022264 | mus_musculus_c3hhej | MGP_C3HHeJ_P0042911 | 99.8397 | 99.5192 | mus_musculus | ENSMUSP00000055969 | 99.8397 | 99.5192 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |