Description

Ensembl ID MGP_C3HHeJ_G0022264 Gene ID Accession -
Symbol Parn Alias - Full Name poly(A)-specific ribonuclease (deadenylation nuclease)
Status Confidence Length 140901 bases Strand Minus strand
Position 16 : 10455846 - 10596746 RNA binding domain RNA_bind , CAF1 , R3H
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0042911 RNA_bind PF08675 2.3e-33 1
MGP_C3HHeJ_P0042911 CAF1 PF04857 8.2e-86 2
MGP_C3HHeJ_P0042911 R3H PF01424 5.2e-07 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Parn-201 MGP_C3HHeJ_T0042911 2902 624aa MGP_C3HHeJ_P0042911"/note="transcript_id=MGP_C3HHeJ_T0042911

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004525347.457627.4953mus_musculus_c3hhejMGP_C3HHeJ_P004291140.384623.3974
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P006686335.616418.7867mus_musculus_c3hhejMGP_C3HHeJ_P004291129.166715.3846

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.5192mus_musculus_129s1svimjMGP_129S1SvImJ_P004321699.839799.5192
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.1987mus_caroliMGP_CAROLIEiJ_P004042499.839799.1987
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.5192mus_musculus_ajMGP_AJ_P004318699.839799.5192
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.6795mus_musculus_balbcjMGP_BALBcJ_P004316999.839799.6795
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.6795mus_musculus_pwkphjMGP_PWKPhJ_P004259999.839799.6795
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291110099.6795mus_musculus_wsbeijMGP_WSBEiJ_P004229610099.6795
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291187.019285.4167rattus_norvegicusENSRNOP0000007253984.18682.6357
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.5192mus_musculus_c57bl6njMGP_C57BL6NJ_P004365499.839799.5192
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.679599.1987mus_spretusMGP_SPRETEiJ_P004227799.679599.1987
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291198.878298.2372mus_spicilegusENSMSIP0000002565571.995371.5286
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P0042911100100mus_musculus_dba2jMGP_DBA2J_P0042980100100
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.5192mus_musculus_akrjMGP_AKRJ_P004315999.839799.5192
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291197.756496.6346mus_pahariMGP_PahariEiJ_P002782197.756496.6346
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.5192mus_musculus_lpjMGP_LPJ_P004304499.839799.5192
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.5192mus_musculus_fvbnjMGP_FVBNJ_P004293399.839799.5192
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.5192mus_musculus_nodshiltjMGP_NODShiLtJ_P004291699.839799.5192
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.5192mus_musculus_nzohlltjMGP_NZOHlLtJ_P004369699.839799.5192
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.5192mus_musculus_casteijMGP_CASTEiJ_P004301299.839799.5192
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P0042911100100mus_musculus_cbajMGP_CBAJ_P0042822100100
MGP_C3HHeJ_G0022264mus_musculus_c3hhejMGP_C3HHeJ_P004291199.839799.5192mus_musculusENSMUSP0000005596999.839799.5192

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression