Description

Ensembl ID MGP_C3HHeJ_G0022175 Gene ID Accession -
Symbol BC048502 Alias - Full Name cDNA sequence BC048502
Status Confidence Length 10674 bases Strand Minus strand
Position 15 : 104705154 - 104715827 RNA binding domain zf-U11-48K
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0042565 zf-U11-48K PF05253 1.2e-18 1
MGP_C3HHeJ_P0042565 zf-U11-48K PF05253 1.2e-18 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
BC048502-201 MGP_C3HHeJ_T0042565 718 154aa MGP_C3HHeJ_P0042565"/note="transcript_id=MGP_C3HHeJ_T0042565

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P004255934.196920.7254mus_musculus_c3hhejMGP_C3HHeJ_P004256542.857125.974
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P005870071.523254.3046mus_musculus_c3hhejMGP_C3HHeJ_P004256570.129953.2468
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P003650216.91398.90208mus_musculus_c3hhejMGP_C3HHeJ_P004256537.01319.4805

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0042876100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P004256510099.3506mus_caroliMGP_CAROLIEiJ_P004009310099.3506
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_ajMGP_AJ_P0042841100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_balbcjMGP_BALBcJ_P0042830100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_pwkphjMGP_PWKPhJ_P0042249100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_wsbeijMGP_WSBEiJ_P0041953100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P004256594.805293.5065rattus_norvegicusENSRNOP0000005214994.805293.5065
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0043313100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_spretusMGP_SPRETEiJ_P0041932100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_spicilegusENSMSIP00000012795100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_dba2jMGP_DBA2J_P0042633100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_akrjMGP_AKRJ_P0042807100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P004256597.402696.7533mus_pahariMGP_PahariEiJ_P004344197.402696.7533
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_lpjMGP_LPJ_P0042704100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_fvbnjMGP_FVBNJ_P0042593100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0042575100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0043353100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_casteijMGP_CASTEiJ_P0042665100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculus_cbajMGP_CBAJ_P0042477100100
MGP_C3HHeJ_G0022175mus_musculus_c3hhejMGP_C3HHeJ_P0042565100100mus_musculusENSMUSP00000068158100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression