Description

Ensembl ID MGP_C3HHeJ_G0022174 Gene ID Accession -
Symbol Gtsf1 Alias - Full Name gametocyte specific factor 1
Status Confidence Length 18885 bases Strand Minus strand
Position 15 : 104672735 - 104691619 RNA binding domain zf-U11-48K
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0042564 zf-U11-48K PF05253 1.8e-20 1
MGP_C3HHeJ_P0042564 zf-U11-48K PF05253 1.8e-20 2
MGP_C3HHeJ_P0042563 zf-U11-48K PF05253 3.4e-20 1
MGP_C3HHeJ_P0042563 zf-U11-48K PF05253 3.4e-20 2
MGP_C3HHeJ_P0042556 zf-U11-48K PF05253 3.8e-20 1
MGP_C3HHeJ_P0042556 zf-U11-48K PF05253 3.8e-20 2
MGP_C3HHeJ_P0042558 zf-U11-48K PF05253 3.8e-20 1
MGP_C3HHeJ_P0042558 zf-U11-48K PF05253 3.8e-20 2
MGP_C3HHeJ_P0042560 zf-U11-48K PF05253 3.8e-20 1
MGP_C3HHeJ_P0042560 zf-U11-48K PF05253 3.8e-20 2
MGP_C3HHeJ_P0042561 zf-U11-48K PF05253 3.8e-20 1
MGP_C3HHeJ_P0042561 zf-U11-48K PF05253 3.8e-20 2
MGP_C3HHeJ_P0042562 zf-U11-48K PF05253 3.8e-20 1
MGP_C3HHeJ_P0042562 zf-U11-48K PF05253 3.8e-20 2
MGP_C3HHeJ_P0042557 zf-U11-48K PF05253 5.3e-20 1
MGP_C3HHeJ_P0042557 zf-U11-48K PF05253 5.3e-20 2
MGP_C3HHeJ_P0042559 zf-U11-48K PF05253 5.7e-20 1
MGP_C3HHeJ_P0042559 zf-U11-48K PF05253 5.7e-20 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Gtsf1-001 MGP_C3HHeJ_T0042556 817 167aa MGP_C3HHeJ_P0042556"/note="transcript_id=MGP_C3HHeJ_T0042556
- MGP_C3HHeJ_T0042557 747 186aa MGP_C3HHeJ_P0042557"/note="transcript_id=MGP_C3HHeJ_T0042557
- MGP_C3HHeJ_T0042558 767 167aa MGP_C3HHeJ_P0042558"/note="transcript_id=MGP_C3HHeJ_T0042558
- MGP_C3HHeJ_T0042559 698 193aa MGP_C3HHeJ_P0042559"/note="transcript_id=MGP_C3HHeJ_T0042559
- MGP_C3HHeJ_T0042560 799 167aa MGP_C3HHeJ_P0042560"/note="transcript_id=MGP_C3HHeJ_T0042560
- MGP_C3HHeJ_T0042561 756 167aa MGP_C3HHeJ_P0042561"/note="transcript_id=MGP_C3HHeJ_T0042561
- MGP_C3HHeJ_T0042562 700 167aa MGP_C3HHeJ_P0042562"/note="transcript_id=MGP_C3HHeJ_T0042562
- MGP_C3HHeJ_T0042563 704 161aa MGP_C3HHeJ_P0042563"/note="transcript_id=MGP_C3HHeJ_T0042563
- MGP_C3HHeJ_T0042564 615 127aa MGP_C3HHeJ_P0042564"/note="transcript_id=MGP_C3HHeJ_T0042564

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P005870046.357625.8278mus_musculus_c3hhejMGP_C3HHeJ_P004255936.269420.2073
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P004256542.857125.974mus_musculus_c3hhejMGP_C3HHeJ_P004255934.196920.7254
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P003650220.474810.6825mus_musculus_c3hhejMGP_C3HHeJ_P004255935.751318.6528

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0042870100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_caroliMGP_CAROLIEiJ_P0040087100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_ajMGP_AJ_P0042835100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_balbcjMGP_BALBcJ_P0042824100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_pwkphjMGP_PWKPhJ_P0042243100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_wsbeijMGP_WSBEiJ_P0041947100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P004255983.419782.3834rattus_norvegicusENSRNOP0000009501991.477390.3409
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0043307100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_spretusMGP_SPRETEiJ_P0041926100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P004255993.264392.228mus_spicilegusENSMSIP0000001275596.774295.6989
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_dba2jMGP_DBA2J_P0042627100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_akrjMGP_AKRJ_P0042801100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P004255997.927597.4093mus_pahariMGP_PahariEiJ_P004343599.473798.9474
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_lpjMGP_LPJ_P0042698100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_fvbnjMGP_FVBNJ_P0042587100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0042569100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0043347100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_casteijMGP_CASTEiJ_P0042659100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculus_cbajMGP_CBAJ_P0042471100100
MGP_C3HHeJ_G0022174mus_musculus_c3hhejMGP_C3HHeJ_P0042559100100mus_musculusENSMUSP0000011567099.484599.4845

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression