RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	MGP_C3HHeJ_G0021016	Gene ID		Accession	-
Symbol	Rnase2b	Alias	-	Full Name	ribonuclease, RNase A family, 2B (liver, eosinophil-derived neurotoxin)
Status	Confidence	Length	759 bases	Strand	Plus strand
Position	14 : 45256046 - 45256804	RNA binding domain	RnaseA
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
MGP_C3HHeJ_P0038936	RnaseA	PF00074	1.3e-36	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Rnase2b-201	MGP_C3HHeJ_T0038936	759	155aa	MGP_C3HHeJ_P0038936"/note="transcript_id=MGP_C3HHeJ_T0038936

Gene Model

Click here to download MGP_C3HHeJ_G0021016's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download MGP_C3HHeJ_G0021016's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038937	69.9346	59.4771	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	69.0323	58.7097
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038941	71.6129	59.3548	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	71.6129	59.3548
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038934	55.5556	41.8301	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	54.8387	41.2903
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038935	47.651	36.9128	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	45.8064	35.4839
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038966	35.9477	19.6078	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	35.4839	19.3548
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038931	44.1379	28.2759	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	41.2903	26.4516
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038929	44.1379	28.2759	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	41.2903	26.4516
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038940	43.75	27.7778	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	40.6452	25.8065
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038925	37.2414	19.3103	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	34.8387	18.0645
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038923	28.8043	16.8478	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	34.1936	20
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038930	47.2973	31.0811	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	45.1613	29.6774
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038922	21.6327	13.8776	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	34.1936	21.9355

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_musculus_129s1svimj	MGP_129S1SvImJ_P0039224	100	100
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_musculus_aj	MGP_AJ_P0039194	100	100
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_musculus_balbcj	MGP_BALBcJ_P0039193	100	100
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_musculus_c57bl6nj	MGP_C57BL6NJ_P0039653	100	100
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_spicilegus	ENSMSIP00000023135	100	100
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_musculus_dba2j	MGP_DBA2J_P0038998	100	100
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_musculus_akrj	MGP_AKRJ_P0039151	100	100
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_musculus_lpj	MGP_LPJ_P0039082	100	100
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_musculus_fvbnj	MGP_FVBNJ_P0038964	100	100
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_musculus_nodshiltj	MGP_NODShiLtJ_P0038954	100	100
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_musculus_nzohlltj	MGP_NZOHlLtJ_P0039693	100	100
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_musculus_cbaj	MGP_CBAJ_P0038852	100	100
MGP_C3HHeJ_G0021016	mus_musculus_c3hhej	MGP_C3HHeJ_P0038936	100	100	mus_musculus	ENSMUSP00000075074	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression