RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C3HHeJ_G0020301 | Gene ID |
|
Accession |
- |
Symbol |
Secisbp2 |
Alias |
- |
Full Name |
SECIS binding protein 2 |
Status |
Confidence |
Length |
34933 bases |
Strand |
Plus strand |
Position |
13 : 50305823 - 50340755 |
RNA binding domain |
Ribosomal_L7Ae |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C3HHeJ_P0036715 |
Ribosomal_L7Ae |
PF01248 |
9.4e-21 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Secisbp2-001 |
MGP_C3HHeJ_T0036715 |
3328 |
858aa |
MGP_C3HHeJ_P0036715"/note="transcript_id=MGP_C3HHeJ_T0036715 |
- |
MGP_C3HHeJ_T0036716 |
1915 |
414aa |
MGP_C3HHeJ_P0036716"/note="transcript_id=MGP_C3HHeJ_T0036716 |
- |
MGP_C3HHeJ_T0036717 |
604 |
No protein |
- |
- |
MGP_C3HHeJ_T0036718 |
556 |
No protein |
- |
- |
MGP_C3HHeJ_T0036719 |
751 |
No protein |
- |
- |
MGP_C3HHeJ_T0036720 |
784 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0057037 | 39.4858 | 26.2626 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 50.1166 | 33.3333 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0037009 | 100 | 100 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 97.669 | 96.5035 | mus_caroli | MGP_CAROLIEiJ_P0034339 | 97.783 | 96.6161 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0036941 | 100 | 100 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0036961 | 100 | 100 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 99.3007 | 99.3007 | mus_musculus_pwkphj | MGP_PWKPhJ_P0036297 | 99.3007 | 99.3007 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0036132 | 100 | 100 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 94.1725 | 91.7249 | rattus_norvegicus | ENSRNOP00000039532 | 95.3955 | 92.9162 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0037418 | 100 | 100 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 99.5338 | 99.3007 | mus_spretus | MGP_SPRETEiJ_P0035970 | 98.9571 | 98.7254 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 98.7179 | 98.3683 | mus_spicilegus | ENSMSIP00000007719 | 98.7179 | 98.3683 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0036767 | 100 | 100 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 99.4173 | 99.4173 | mus_musculus_akrj | MGP_AKRJ_P0036911 | 99.4173 | 99.4173 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 96.2704 | 94.1725 | mus_pahari | MGP_PahariEiJ_P0040947 | 96.4953 | 94.3925 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0036901 | 100 | 100 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0036735 | 100 | 100 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0036732 | 100 | 100 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0037473 | 100 | 100 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 98.8345 | 98.4848 | mus_musculus_casteij | MGP_CASTEiJ_P0036657 | 98.9498 | 98.5998 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0036622 | 100 | 100 |
MGP_C3HHeJ_G0020301 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036715 | 100 | 100 | mus_musculus | ENSMUSP00000045740 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |