Description

Ensembl ID MGP_C3HHeJ_G0020301 Gene ID Accession -
Symbol Secisbp2 Alias - Full Name SECIS binding protein 2
Status Confidence Length 34933 bases Strand Plus strand
Position 13 : 50305823 - 50340755 RNA binding domain Ribosomal_L7Ae
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0036715 Ribosomal_L7Ae PF01248 9.4e-21 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Secisbp2-001 MGP_C3HHeJ_T0036715 3328 858aa MGP_C3HHeJ_P0036715"/note="transcript_id=MGP_C3HHeJ_T0036715
- MGP_C3HHeJ_T0036716 1915 414aa MGP_C3HHeJ_P0036716"/note="transcript_id=MGP_C3HHeJ_T0036716
- MGP_C3HHeJ_T0036717 604 No protein -
- MGP_C3HHeJ_T0036718 556 No protein -
- MGP_C3HHeJ_T0036719 751 No protein -
- MGP_C3HHeJ_T0036720 784 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P005703739.485826.2626mus_musculus_c3hhejMGP_C3HHeJ_P003671550.116633.3333

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P0036715100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0037009100100
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P003671597.66996.5035mus_caroliMGP_CAROLIEiJ_P003433997.78396.6161
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P0036715100100mus_musculus_ajMGP_AJ_P0036941100100
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P0036715100100mus_musculus_balbcjMGP_BALBcJ_P0036961100100
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P003671599.300799.3007mus_musculus_pwkphjMGP_PWKPhJ_P003629799.300799.3007
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P0036715100100mus_musculus_wsbeijMGP_WSBEiJ_P0036132100100
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P003671594.172591.7249rattus_norvegicusENSRNOP0000003953295.395592.9162
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P0036715100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0037418100100
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P003671599.533899.3007mus_spretusMGP_SPRETEiJ_P003597098.957198.7254
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P003671598.717998.3683mus_spicilegusENSMSIP0000000771998.717998.3683
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P0036715100100mus_musculus_dba2jMGP_DBA2J_P0036767100100
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P003671599.417399.4173mus_musculus_akrjMGP_AKRJ_P003691199.417399.4173
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P003671596.270494.1725mus_pahariMGP_PahariEiJ_P004094796.495394.3925
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P0036715100100mus_musculus_lpjMGP_LPJ_P0036901100100
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P0036715100100mus_musculus_fvbnjMGP_FVBNJ_P0036735100100
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P0036715100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0036732100100
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P0036715100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0037473100100
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P003671598.834598.4848mus_musculus_casteijMGP_CASTEiJ_P003665798.949898.5998
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P0036715100100mus_musculus_cbajMGP_CBAJ_P0036622100100
MGP_C3HHeJ_G0020301mus_musculus_c3hhejMGP_C3HHeJ_P0036715100100mus_musculusENSMUSP00000045740100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression