Description

Ensembl ID MGP_C3HHeJ_G0020208 Gene ID Accession -
Symbol Rpp40 Alias - Full Name ribonuclease P 40 subunit
Status Confidence Length 12894 bases Strand Minus strand
Position 13 : 33745688 - 33758581 RNA binding domain Ribonuc_P_40
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0036468 Ribonuc_P_40 PF08584 3.3e-94 1
MGP_C3HHeJ_P0036471 Ribonuc_P_40 PF08584 3.3e-78 1
MGP_C3HHeJ_P0036469 Ribonuc_P_40 PF08584 2.1e-18 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rpp40-001 MGP_C3HHeJ_T0036468 4383 363aa MGP_C3HHeJ_P0036468"/note="transcript_id=MGP_C3HHeJ_T0036468
- MGP_C3HHeJ_T0036469 276 83aa MGP_C3HHeJ_P0036469"/note="transcript_id=MGP_C3HHeJ_T0036469
- MGP_C3HHeJ_T0036470 3270 No protein -
- MGP_C3HHeJ_T0036471 1053 340aa MGP_C3HHeJ_P0036471"/note="transcript_id=MGP_C3HHeJ_T0036471

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0020208

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0036763100100
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P003646898.622698.3471mus_caroliMGP_CAROLIEiJ_P003410398.622698.3471
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculus_ajMGP_AJ_P0036696100100
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculus_balbcjMGP_BALBcJ_P0036716100100
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculus_pwkphjMGP_PWKPhJ_P0036041100100
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculus_wsbeijMGP_WSBEiJ_P0035889100100
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P003646897.245293.6639rattus_norvegicusENSRNOP0000006296293.88390.4255
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0037176100100
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P003646899.173699.1736mus_spretusMGP_SPRETEiJ_P003571099.173699.1736
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P003646899.724599.449mus_spicilegusENSMSIP0000002050399.724599.449
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P003646899.724599.449mus_musculus_dba2jMGP_DBA2J_P003652299.724599.449
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculus_akrjMGP_AKRJ_P0036665100100
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P003646898.347196.6942mus_pahariMGP_PahariEiJ_P004071298.347196.6942
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculus_lpjMGP_LPJ_P0036657100100
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculus_fvbnjMGP_FVBNJ_P0036493100100
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0036489100100
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0037227100100
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P003646899.724599.7245mus_musculus_casteijMGP_CASTEiJ_P003639099.724599.7245
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculus_cbajMGP_CBAJ_P0036376100100
MGP_C3HHeJ_G0020208mus_musculus_c3hhejMGP_C3HHeJ_P0036468100100mus_musculusENSMUSP00000130290100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression