RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C3HHeJ_G0020208 | Gene ID |
|
Accession |
- |
Symbol |
Rpp40 |
Alias |
- |
Full Name |
ribonuclease P 40 subunit |
Status |
Confidence |
Length |
12894 bases |
Strand |
Minus strand |
Position |
13 : 33745688 - 33758581 |
RNA binding domain |
Ribonuc_P_40 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C3HHeJ_P0036468 |
Ribonuc_P_40 |
PF08584 |
3.3e-94 |
1 |
MGP_C3HHeJ_P0036471 |
Ribonuc_P_40 |
PF08584 |
3.3e-78 |
1 |
MGP_C3HHeJ_P0036469 |
Ribonuc_P_40 |
PF08584 |
2.1e-18 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rpp40-001 |
MGP_C3HHeJ_T0036468 |
4383 |
363aa |
MGP_C3HHeJ_P0036468"/note="transcript_id=MGP_C3HHeJ_T0036468 |
- |
MGP_C3HHeJ_T0036469 |
276 |
83aa |
MGP_C3HHeJ_P0036469"/note="transcript_id=MGP_C3HHeJ_T0036469 |
- |
MGP_C3HHeJ_T0036470 |
3270 |
No protein |
- |
- |
MGP_C3HHeJ_T0036471 |
1053 |
340aa |
MGP_C3HHeJ_P0036471"/note="transcript_id=MGP_C3HHeJ_T0036471 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0020208 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0036763 | 100 | 100 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 98.6226 | 98.3471 | mus_caroli | MGP_CAROLIEiJ_P0034103 | 98.6226 | 98.3471 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0036696 | 100 | 100 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0036716 | 100 | 100 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0036041 | 100 | 100 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0035889 | 100 | 100 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 97.2452 | 93.6639 | rattus_norvegicus | ENSRNOP00000062962 | 93.883 | 90.4255 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0037176 | 100 | 100 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 99.1736 | 99.1736 | mus_spretus | MGP_SPRETEiJ_P0035710 | 99.1736 | 99.1736 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 99.7245 | 99.449 | mus_spicilegus | ENSMSIP00000020503 | 99.7245 | 99.449 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 99.7245 | 99.449 | mus_musculus_dba2j | MGP_DBA2J_P0036522 | 99.7245 | 99.449 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0036665 | 100 | 100 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 98.3471 | 96.6942 | mus_pahari | MGP_PahariEiJ_P0040712 | 98.3471 | 96.6942 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0036657 | 100 | 100 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0036493 | 100 | 100 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0036489 | 100 | 100 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0037227 | 100 | 100 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 99.7245 | 99.7245 | mus_musculus_casteij | MGP_CASTEiJ_P0036390 | 99.7245 | 99.7245 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0036376 | 100 | 100 |
MGP_C3HHeJ_G0020208 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036468 | 100 | 100 | mus_musculus | ENSMUSP00000130290 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |