RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C3HHeJ_G0018040 | Gene ID |
|
Accession |
- |
Symbol |
Aff4 |
Alias |
- |
Full Name |
AF4/FMR2 family, member 4 |
Status |
Confidence |
Length |
76960 bases |
Strand |
Plus strand |
Position |
11 : 52373384 - 52450343 |
RNA binding domain |
AF-4 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C3HHeJ_P0028769 |
AF-4 |
PF05110 |
4.2e-171 |
1 |
MGP_C3HHeJ_P0028770 |
AF-4 |
PF05110 |
4.8e-48 |
1 |
MGP_C3HHeJ_P0028773 |
AF-4 |
PF05110 |
4.5e-40 |
1 |
MGP_C3HHeJ_P0028773 |
AF-4 |
PF05110 |
4.5e-40 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Aff4-001 |
MGP_C3HHeJ_T0028769 |
10095 |
1160aa |
MGP_C3HHeJ_P0028769"/note="transcript_id=MGP_C3HHeJ_T0028769 |
- |
MGP_C3HHeJ_T0028770 |
464 |
122aa |
MGP_C3HHeJ_P0028770"/note="transcript_id=MGP_C3HHeJ_T0028770 |
- |
MGP_C3HHeJ_T0028771 |
3818 |
No protein |
- |
- |
MGP_C3HHeJ_T0028772 |
600 |
No protein |
- |
- |
MGP_C3HHeJ_T0028773 |
476 |
158aa |
MGP_C3HHeJ_P0028773"/note="transcript_id=MGP_C3HHeJ_T0028773 |
- |
MGP_C3HHeJ_T0028774 |
429 |
No protein |
- |
- |
MGP_C3HHeJ_T0028775 |
687 |
No protein |
- |
- |
MGP_C3HHeJ_T0028776 |
929 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 48.1692 | 33.7673 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 51.0345 | 35.7759 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0095825 | 47.7201 | 32.3899 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 52.3276 | 35.5172 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0072573 | 49.2659 | 34.3393 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 52.069 | 36.2931 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0029020 | 100 | 100 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 99.2241 | 99.1379 | mus_caroli | MGP_CAROLIEiJ_P0026600 | 99.3098 | 99.2235 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0028986 | 100 | 100 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0028967 | 100 | 100 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 9.56897 | 9.05172 | mus_musculus_pwkphj | MGP_PWKPhJ_P0028142 | 90.9836 | 86.0656 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0028258 | 100 | 100 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 97.7586 | 96.8103 | rattus_norvegicus | ENSRNOP00000009440 | 97.843 | 96.8939 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0029463 | 100 | 100 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 99.9138 | mus_spretus | MGP_SPRETEiJ_P0027975 | 100 | 99.9138 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 99.6552 | 99.1379 | mus_spicilegus | ENSMSIP00000022336 | 99.6552 | 99.1379 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0028832 | 100 | 100 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0028955 | 100 | 100 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 99.1379 | 98.6207 | mus_pahari | MGP_PahariEiJ_P0033375 | 99.1379 | 98.6207 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0028928 | 100 | 100 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 13.1034 | 12.8448 | mus_musculus_fvbnj | MGP_FVBNJ_P0028802 | 96.2025 | 94.3038 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0028787 | 100 | 100 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0029502 | 100 | 100 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 99.9138 | mus_musculus_casteij | MGP_CASTEiJ_P0028435 | 100 | 99.9138 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0028690 | 100 | 100 |
MGP_C3HHeJ_G0018040 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 100 | 100 | mus_musculus | ENSMUSP00000051479 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |