Description

Ensembl ID MGP_C3HHeJ_G0017585 Gene ID Accession -
Symbol R3hdm2 Alias - Full Name R3H domain containing 2
Status Confidence Length 125666 bases Strand Plus strand
Position 10 : 129607428 - 129733093 RNA binding domain R3H , SUZ
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0027125 R3H PF01424 9.5e-10 1
MGP_C3HHeJ_P0027119 R3H PF01424 9.9e-10 1
MGP_C3HHeJ_P0027120 R3H PF01424 1e-09 1
MGP_C3HHeJ_P0027115 R3H PF01424 1e-09 1
MGP_C3HHeJ_P0027115 SUZ PF12752 2.2e-10 2
MGP_C3HHeJ_P0027116 R3H PF01424 1e-09 1
MGP_C3HHeJ_P0027116 SUZ PF12752 2.2e-10 2
MGP_C3HHeJ_P0027123 R3H PF01424 1e-09 1
MGP_C3HHeJ_P0027123 SUZ PF12752 2.1e-10 2
MGP_C3HHeJ_P0027117 R3H PF01424 1.1e-09 1
MGP_C3HHeJ_P0027117 SUZ PF12752 2.2e-10 2
MGP_C3HHeJ_P0027122 R3H PF01424 1.1e-09 1
MGP_C3HHeJ_P0027122 SUZ PF12752 2.2e-10 2
MGP_C3HHeJ_P0027126 SUZ PF12752 2.1e-10 1
MGP_C3HHeJ_P0027128 SUZ PF12752 1.3e-08 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
R3hdm2-001 MGP_C3HHeJ_T0027114 407 27aa MGP_C3HHeJ_P0027114"/note="transcript_id=MGP_C3HHeJ_T0027114
- MGP_C3HHeJ_T0027115 4136 1044aa MGP_C3HHeJ_P0027115"/note="transcript_id=MGP_C3HHeJ_T0027115
- MGP_C3HHeJ_T0027116 4025 1044aa MGP_C3HHeJ_P0027116"/note="transcript_id=MGP_C3HHeJ_T0027116
- MGP_C3HHeJ_T0027117 3971 1026aa MGP_C3HHeJ_P0027117"/note="transcript_id=MGP_C3HHeJ_T0027117
- MGP_C3HHeJ_T0027118 322 62aa MGP_C3HHeJ_P0027118"/note="transcript_id=MGP_C3HHeJ_T0027118
- MGP_C3HHeJ_T0027119 4171 999aa MGP_C3HHeJ_P0027119"/note="transcript_id=MGP_C3HHeJ_T0027119
- MGP_C3HHeJ_T0027120 3639 1012aa MGP_C3HHeJ_P0027120"/note="transcript_id=MGP_C3HHeJ_T0027120
- MGP_C3HHeJ_T0027121 447 98aa MGP_C3HHeJ_P0027121"/note="transcript_id=MGP_C3HHeJ_T0027121
- MGP_C3HHeJ_T0027122 3735 1026aa MGP_C3HHeJ_P0027122"/note="transcript_id=MGP_C3HHeJ_T0027122
- MGP_C3HHeJ_T0027123 3650 992aa MGP_C3HHeJ_P0027123"/note="transcript_id=MGP_C3HHeJ_T0027123
- MGP_C3HHeJ_T0027124 2906 102aa MGP_C3HHeJ_P0027124"/note="transcript_id=MGP_C3HHeJ_T0027124
- MGP_C3HHeJ_T0027125 2937 978aa MGP_C3HHeJ_P0027125"/note="transcript_id=MGP_C3HHeJ_T0027125
- MGP_C3HHeJ_T0027126 273 91aa MGP_C3HHeJ_P0027126"/note="transcript_id=MGP_C3HHeJ_T0027126
- MGP_C3HHeJ_T0027127 395 No protein -
- MGP_C3HHeJ_T0027128 2902 743aa MGP_C3HHeJ_P0027128"/note="transcript_id=MGP_C3HHeJ_T0027128
- MGP_C3HHeJ_T0027129 874 No protein -
- MGP_C3HHeJ_T0027130 763 No protein -
- MGP_C3HHeJ_T0027131 537 No protein -
- MGP_C3HHeJ_T0027132 462 154aa MGP_C3HHeJ_P0027132"/note="transcript_id=MGP_C3HHeJ_T0027132
- MGP_C3HHeJ_T0027133 934 263aa MGP_C3HHeJ_P0027133"/note="transcript_id=MGP_C3HHeJ_T0027133

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P002161764.052948.8106mus_musculus_c3hhejMGP_C3HHeJ_P002711569.63653.0651
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P009460860.692244.1286mus_musculus_c3hhejMGP_C3HHeJ_P002711547.030734.1954

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P0027115100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0027359100100
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P002711599.712699.2337mus_caroliMGP_CAROLIEiJ_P002501699.617299.1388
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P0027115100100mus_musculus_ajMGP_AJ_P0027327100100
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P002711598.275998.2759mus_musculus_balbcjMGP_BALBcJ_P0027308100100
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P002711599.808499.7126mus_musculus_pwkphjMGP_PWKPhJ_P002641399.904199.8082
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P0027115100100mus_musculus_wsbeijMGP_WSBEiJ_P0026636100100
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P002711598.563297.4138rattus_norvegicusENSRNOP0000007301598.468997.3206
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P0027115100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0027810100100
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P002711599.904299.8084mus_spretusMGP_SPRETEiJ_P002629499.713299.6176
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P002711599.808499.6169mus_spicilegusENSMSIP0000000241899.904199.7124
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P0027115100100mus_musculus_dba2jMGP_DBA2J_P0027163100100
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P0027115100100mus_musculus_akrjMGP_AKRJ_P002730297.388197.3881
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P002711598.946498.1801mus_pahariMGP_PahariEiJ_P008763999.231598.463
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P0027115100100mus_musculus_lpjMGP_LPJ_P0027281100100
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P0027115100100mus_musculus_fvbnjMGP_FVBNJ_P0027158100100
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P0027115100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0027138100100
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P0027115100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0027834100100
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P002711599.904299.9042mus_musculus_casteijMGP_CASTEiJ_P0026712100100
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P0027115100100mus_musculus_cbajMGP_CBAJ_P0027044100100
MGP_C3HHeJ_G0017585mus_musculus_c3hhejMGP_C3HHeJ_P0027115100100mus_musculusENSMUSP00000126608100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression