RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C3HHeJ_G0017585 | Gene ID |
|
Accession |
- |
Symbol |
R3hdm2 |
Alias |
- |
Full Name |
R3H domain containing 2 |
Status |
Confidence |
Length |
125666 bases |
Strand |
Plus strand |
Position |
10 : 129607428 - 129733093 |
RNA binding domain |
R3H , SUZ |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C3HHeJ_P0027125 |
R3H |
PF01424 |
9.5e-10 |
1 |
MGP_C3HHeJ_P0027119 |
R3H |
PF01424 |
9.9e-10 |
1 |
MGP_C3HHeJ_P0027120 |
R3H |
PF01424 |
1e-09 |
1 |
MGP_C3HHeJ_P0027115 |
R3H |
PF01424 |
1e-09 |
1 |
MGP_C3HHeJ_P0027115 |
SUZ |
PF12752 |
2.2e-10 |
2 |
MGP_C3HHeJ_P0027116 |
R3H |
PF01424 |
1e-09 |
1 |
MGP_C3HHeJ_P0027116 |
SUZ |
PF12752 |
2.2e-10 |
2 |
MGP_C3HHeJ_P0027123 |
R3H |
PF01424 |
1e-09 |
1 |
MGP_C3HHeJ_P0027123 |
SUZ |
PF12752 |
2.1e-10 |
2 |
MGP_C3HHeJ_P0027117 |
R3H |
PF01424 |
1.1e-09 |
1 |
MGP_C3HHeJ_P0027117 |
SUZ |
PF12752 |
2.2e-10 |
2 |
MGP_C3HHeJ_P0027122 |
R3H |
PF01424 |
1.1e-09 |
1 |
MGP_C3HHeJ_P0027122 |
SUZ |
PF12752 |
2.2e-10 |
2 |
MGP_C3HHeJ_P0027126 |
SUZ |
PF12752 |
2.1e-10 |
1 |
MGP_C3HHeJ_P0027128 |
SUZ |
PF12752 |
1.3e-08 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
R3hdm2-001 |
MGP_C3HHeJ_T0027114 |
407 |
27aa |
MGP_C3HHeJ_P0027114"/note="transcript_id=MGP_C3HHeJ_T0027114 |
- |
MGP_C3HHeJ_T0027115 |
4136 |
1044aa |
MGP_C3HHeJ_P0027115"/note="transcript_id=MGP_C3HHeJ_T0027115 |
- |
MGP_C3HHeJ_T0027116 |
4025 |
1044aa |
MGP_C3HHeJ_P0027116"/note="transcript_id=MGP_C3HHeJ_T0027116 |
- |
MGP_C3HHeJ_T0027117 |
3971 |
1026aa |
MGP_C3HHeJ_P0027117"/note="transcript_id=MGP_C3HHeJ_T0027117 |
- |
MGP_C3HHeJ_T0027118 |
322 |
62aa |
MGP_C3HHeJ_P0027118"/note="transcript_id=MGP_C3HHeJ_T0027118 |
- |
MGP_C3HHeJ_T0027119 |
4171 |
999aa |
MGP_C3HHeJ_P0027119"/note="transcript_id=MGP_C3HHeJ_T0027119 |
- |
MGP_C3HHeJ_T0027120 |
3639 |
1012aa |
MGP_C3HHeJ_P0027120"/note="transcript_id=MGP_C3HHeJ_T0027120 |
- |
MGP_C3HHeJ_T0027121 |
447 |
98aa |
MGP_C3HHeJ_P0027121"/note="transcript_id=MGP_C3HHeJ_T0027121 |
- |
MGP_C3HHeJ_T0027122 |
3735 |
1026aa |
MGP_C3HHeJ_P0027122"/note="transcript_id=MGP_C3HHeJ_T0027122 |
- |
MGP_C3HHeJ_T0027123 |
3650 |
992aa |
MGP_C3HHeJ_P0027123"/note="transcript_id=MGP_C3HHeJ_T0027123 |
- |
MGP_C3HHeJ_T0027124 |
2906 |
102aa |
MGP_C3HHeJ_P0027124"/note="transcript_id=MGP_C3HHeJ_T0027124 |
- |
MGP_C3HHeJ_T0027125 |
2937 |
978aa |
MGP_C3HHeJ_P0027125"/note="transcript_id=MGP_C3HHeJ_T0027125 |
- |
MGP_C3HHeJ_T0027126 |
273 |
91aa |
MGP_C3HHeJ_P0027126"/note="transcript_id=MGP_C3HHeJ_T0027126 |
- |
MGP_C3HHeJ_T0027127 |
395 |
No protein |
- |
- |
MGP_C3HHeJ_T0027128 |
2902 |
743aa |
MGP_C3HHeJ_P0027128"/note="transcript_id=MGP_C3HHeJ_T0027128 |
- |
MGP_C3HHeJ_T0027129 |
874 |
No protein |
- |
- |
MGP_C3HHeJ_T0027130 |
763 |
No protein |
- |
- |
MGP_C3HHeJ_T0027131 |
537 |
No protein |
- |
- |
MGP_C3HHeJ_T0027132 |
462 |
154aa |
MGP_C3HHeJ_P0027132"/note="transcript_id=MGP_C3HHeJ_T0027132 |
- |
MGP_C3HHeJ_T0027133 |
934 |
263aa |
MGP_C3HHeJ_P0027133"/note="transcript_id=MGP_C3HHeJ_T0027133 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 64.0529 | 48.8106 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 69.636 | 53.0651 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0094608 | 60.6922 | 44.1286 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 47.0307 | 34.1954 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0027359 | 100 | 100 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 99.7126 | 99.2337 | mus_caroli | MGP_CAROLIEiJ_P0025016 | 99.6172 | 99.1388 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0027327 | 100 | 100 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 98.2759 | 98.2759 | mus_musculus_balbcj | MGP_BALBcJ_P0027308 | 100 | 100 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 99.8084 | 99.7126 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026413 | 99.9041 | 99.8082 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0026636 | 100 | 100 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 98.5632 | 97.4138 | rattus_norvegicus | ENSRNOP00000073015 | 98.4689 | 97.3206 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027810 | 100 | 100 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 99.9042 | 99.8084 | mus_spretus | MGP_SPRETEiJ_P0026294 | 99.7132 | 99.6176 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 99.8084 | 99.6169 | mus_spicilegus | ENSMSIP00000002418 | 99.9041 | 99.7124 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0027163 | 100 | 100 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0027302 | 97.3881 | 97.3881 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 98.9464 | 98.1801 | mus_pahari | MGP_PahariEiJ_P0087639 | 99.2315 | 98.463 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0027281 | 100 | 100 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0027158 | 100 | 100 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0027138 | 100 | 100 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0027834 | 100 | 100 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 99.9042 | 99.9042 | mus_musculus_casteij | MGP_CASTEiJ_P0026712 | 100 | 100 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0027044 | 100 | 100 |
MGP_C3HHeJ_G0017585 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 100 | 100 | mus_musculus | ENSMUSP00000126608 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |