Description

Ensembl ID MGP_C3HHeJ_G0016665 Gene ID Accession -
Symbol Taf1a Alias - Full Name TATA-box binding protein associated factor, RNA polymerase I, A
Status Confidence Length 23810 bases Strand Plus strand
Position 1 : 188497324 - 188521133 RNA binding domain TAF1_subA
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0023793 TAF1_subA PF14929 2.4e-129 1
MGP_C3HHeJ_P0023791 TAF1_subA PF14929 3.2e-126 1
MGP_C3HHeJ_P0023792 TAF1_subA PF14929 1.3e-98 1
MGP_C3HHeJ_P0023794 TAF1_subA PF14929 1.3e-19 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Taf1a-001 MGP_C3HHeJ_T0023791 1499 462aa MGP_C3HHeJ_P0023791"/note="transcript_id=MGP_C3HHeJ_T0023791
- MGP_C3HHeJ_T0023792 1254 360aa MGP_C3HHeJ_P0023792"/note="transcript_id=MGP_C3HHeJ_T0023792
- MGP_C3HHeJ_T0023793 2248 452aa MGP_C3HHeJ_P0023793"/note="transcript_id=MGP_C3HHeJ_T0023793
- MGP_C3HHeJ_T0023794 1132 90aa MGP_C3HHeJ_P0023794"/note="transcript_id=MGP_C3HHeJ_T0023794

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0016665

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P0023791100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0024045100100
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P002379175.541173.1602mus_caroliMGP_CAROLIEiJ_P002176296.944493.8889
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P0023791100100mus_musculus_ajMGP_AJ_P0024015100100
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P0023791100100mus_musculus_balbcjMGP_BALBcJ_P0023989100100
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P0023791100100mus_musculus_pwkphjMGP_PWKPhJ_P0023058100100
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P0023791100100mus_musculus_wsbeijMGP_WSBEiJ_P0023351100100
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P002379193.722987.013rattus_norvegicusENSRNOP0000006889995.58588.7417
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P0023791100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0024502100100
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P002379199.350698.7013mus_spretusMGP_SPRETEiJ_P002283599.350698.7013
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P0023791100100mus_musculus_dba2jMGP_DBA2J_P0023847100100
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P0023791100100mus_musculus_akrjMGP_AKRJ_P0023984100100
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P002379176.623472.0779mus_pahariMGP_PahariEiJ_P007701093.157987.6316
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P002379199.350697.8355mus_musculus_lpjMGP_LPJ_P002396397.452295.966
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P0023791100100mus_musculus_fvbnjMGP_FVBNJ_P0023852100100
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P0023791100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0023840100100
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P0023791100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0024540100100
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P002379176.190576.1905mus_musculus_casteijMGP_CASTEiJ_P002334097.777897.7778
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P0023791100100mus_musculus_cbajMGP_CBAJ_P0023729100100
MGP_C3HHeJ_G0016665mus_musculus_c3hhejMGP_C3HHeJ_P002379197.402695.8874mus_musculusENSMUSP0000014221399.337797.7925

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression