RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C3HHeJ_G0016665 | Gene ID |
|
Accession |
- |
Symbol |
Taf1a |
Alias |
- |
Full Name |
TATA-box binding protein associated factor, RNA polymerase I, A |
Status |
Confidence |
Length |
23810 bases |
Strand |
Plus strand |
Position |
1 : 188497324 - 188521133 |
RNA binding domain |
TAF1_subA |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C3HHeJ_P0023793 |
TAF1_subA |
PF14929 |
2.4e-129 |
1 |
MGP_C3HHeJ_P0023791 |
TAF1_subA |
PF14929 |
3.2e-126 |
1 |
MGP_C3HHeJ_P0023792 |
TAF1_subA |
PF14929 |
1.3e-98 |
1 |
MGP_C3HHeJ_P0023794 |
TAF1_subA |
PF14929 |
1.3e-19 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Taf1a-001 |
MGP_C3HHeJ_T0023791 |
1499 |
462aa |
MGP_C3HHeJ_P0023791"/note="transcript_id=MGP_C3HHeJ_T0023791 |
- |
MGP_C3HHeJ_T0023792 |
1254 |
360aa |
MGP_C3HHeJ_P0023792"/note="transcript_id=MGP_C3HHeJ_T0023792 |
- |
MGP_C3HHeJ_T0023793 |
2248 |
452aa |
MGP_C3HHeJ_P0023793"/note="transcript_id=MGP_C3HHeJ_T0023793 |
- |
MGP_C3HHeJ_T0023794 |
1132 |
90aa |
MGP_C3HHeJ_P0023794"/note="transcript_id=MGP_C3HHeJ_T0023794 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0016665 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0024045 | 100 | 100 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 75.5411 | 73.1602 | mus_caroli | MGP_CAROLIEiJ_P0021762 | 96.9444 | 93.8889 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0024015 | 100 | 100 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0023989 | 100 | 100 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0023058 | 100 | 100 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0023351 | 100 | 100 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 93.7229 | 87.013 | rattus_norvegicus | ENSRNOP00000068899 | 95.585 | 88.7417 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0024502 | 100 | 100 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 99.3506 | 98.7013 | mus_spretus | MGP_SPRETEiJ_P0022835 | 99.3506 | 98.7013 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0023847 | 100 | 100 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0023984 | 100 | 100 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 76.6234 | 72.0779 | mus_pahari | MGP_PahariEiJ_P0077010 | 93.1579 | 87.6316 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 99.3506 | 97.8355 | mus_musculus_lpj | MGP_LPJ_P0023963 | 97.4522 | 95.966 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0023852 | 100 | 100 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0023840 | 100 | 100 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0024540 | 100 | 100 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 76.1905 | 76.1905 | mus_musculus_casteij | MGP_CASTEiJ_P0023340 | 97.7778 | 97.7778 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0023729 | 100 | 100 |
MGP_C3HHeJ_G0016665 | mus_musculus_c3hhej | MGP_C3HHeJ_P0023791 | 97.4026 | 95.8874 | mus_musculus | ENSMUSP00000142213 | 99.3377 | 97.7925 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |