RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C3HHeJ_G0016195 | Gene ID |
|
Accession |
- |
Symbol |
R3hdm1 |
Alias |
- |
Full Name |
R3H domain containing 1 |
Status |
Confidence |
Length |
136326 bases |
Strand |
Plus strand |
Position |
1 : 130342066 - 130478391 |
RNA binding domain |
R3H , SUZ |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C3HHeJ_P0021616 |
R3H |
PF01424 |
6e-12 |
1 |
MGP_C3HHeJ_P0021622 |
R3H |
PF01424 |
7.6e-12 |
1 |
MGP_C3HHeJ_P0021622 |
SUZ |
PF12752 |
1.4e-11 |
2 |
MGP_C3HHeJ_P0021620 |
R3H |
PF01424 |
1.8e-11 |
1 |
MGP_C3HHeJ_P0021620 |
SUZ |
PF12752 |
1.8e-11 |
2 |
MGP_C3HHeJ_P0021618 |
R3H |
PF01424 |
2.1e-11 |
1 |
MGP_C3HHeJ_P0021618 |
SUZ |
PF12752 |
2.1e-11 |
2 |
MGP_C3HHeJ_P0021617 |
R3H |
PF01424 |
4.9e-11 |
1 |
MGP_C3HHeJ_P0021617 |
SUZ |
PF12752 |
5.3e-11 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
R3hdm1-002 |
MGP_C3HHeJ_T0021615 |
2438 |
No protein |
- |
- |
MGP_C3HHeJ_T0021616 |
1130 |
239aa |
MGP_C3HHeJ_P0021616"/note="transcript_id=MGP_C3HHeJ_T0021616 |
- |
MGP_C3HHeJ_T0021617 |
4795 |
1135aa |
MGP_C3HHeJ_P0021617"/note="transcript_id=MGP_C3HHeJ_T0021617 |
- |
MGP_C3HHeJ_T0021618 |
3986 |
549aa |
MGP_C3HHeJ_P0021618"/note="transcript_id=MGP_C3HHeJ_T0021618 |
- |
MGP_C3HHeJ_T0021619 |
8389 |
No protein |
- |
- |
MGP_C3HHeJ_T0021620 |
1661 |
486aa |
MGP_C3HHeJ_P0021620"/note="transcript_id=MGP_C3HHeJ_T0021620 |
- |
MGP_C3HHeJ_T0021621 |
453 |
32aa |
MGP_C3HHeJ_P0021621"/note="transcript_id=MGP_C3HHeJ_T0021621 |
- |
MGP_C3HHeJ_T0021622 |
1040 |
287aa |
MGP_C3HHeJ_P0021622"/note="transcript_id=MGP_C3HHeJ_T0021622 |
- |
MGP_C3HHeJ_T0021623 |
6510 |
No protein |
- |
- |
MGP_C3HHeJ_T0021624 |
597 |
No protein |
- |
- |
MGP_C3HHeJ_T0021625 |
4986 |
No protein |
- |
- |
MGP_C3HHeJ_T0021626 |
549 |
182aa |
MGP_C3HHeJ_P0021626"/note="transcript_id=MGP_C3HHeJ_T0021626 |
- |
MGP_C3HHeJ_T0021627 |
1155 |
385aa |
MGP_C3HHeJ_P0021627"/note="transcript_id=MGP_C3HHeJ_T0021627 |
- |
MGP_C3HHeJ_T0021628 |
3709 |
No protein |
- |
- |
MGP_C3HHeJ_T0021629 |
6389 |
No protein |
- |
- |
MGP_C3HHeJ_T0021630 |
1588 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027115 | 69.636 | 53.0651 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 64.0529 | 48.8106 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0094608 | 66.7491 | 48.7021 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 47.5771 | 34.7137 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 99.9119 | 99.9119 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0021875 | 99.2995 | 99.2995 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 99.8238 | 99.1189 | mus_caroli | MGP_CAROLIEiJ_P0019622 | 99.8238 | 99.1189 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0021846 | 100 | 100 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0021810 | 100 | 100 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 99.8238 | 99.8238 | mus_musculus_pwkphj | MGP_PWKPhJ_P0020885 | 99.8238 | 99.8238 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0021204 | 100 | 100 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 98.6784 | 97.533 | rattus_norvegicus | ENSRNOP00000005372 | 98.8526 | 97.7052 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0022326 | 100 | 100 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 99.8238 | 99.8238 | mus_spretus | MGP_SPRETEiJ_P0020655 | 99.8238 | 99.8238 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 99.207 | 99.1189 | mus_spicilegus | ENSMSIP00000030807 | 96.8186 | 96.7326 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0021692 | 100 | 100 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0021817 | 100 | 100 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 99.4714 | 98.8546 | mus_pahari | MGP_PahariEiJ_P0074921 | 99.5591 | 98.9418 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0021792 | 100 | 100 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0021704 | 100 | 100 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0021676 | 100 | 100 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0022361 | 100 | 100 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 99.8238 | 99.8238 | mus_musculus_casteij | MGP_CASTEiJ_P0021146 | 99.8238 | 99.8238 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0021566 | 100 | 100 |
MGP_C3HHeJ_G0016195 | mus_musculus_c3hhej | MGP_C3HHeJ_P0021617 | 100 | 100 | mus_musculus | ENSMUSP00000043103 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |