RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_C3HHeJ_G0015721 | Gene ID |
|
Accession |
- |
Symbol |
Aff3 |
Alias |
- |
Full Name |
AF4/FMR2 family, member 3 |
Status |
Confidence |
Length |
506971 bases |
Strand |
Minus strand |
Position |
1 : 36550505 - 37057475 |
RNA binding domain |
AF-4 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_C3HHeJ_P0019237 |
AF-4 |
PF05110 |
1.2e-130 |
1 |
MGP_C3HHeJ_P0019237 |
AF-4 |
PF05110 |
1.2e-130 |
2 |
MGP_C3HHeJ_P0019239 |
AF-4 |
PF05110 |
1.3e-130 |
1 |
MGP_C3HHeJ_P0019239 |
AF-4 |
PF05110 |
1.3e-130 |
2 |
MGP_C3HHeJ_P0019238 |
AF-4 |
PF05110 |
1.3e-129 |
1 |
MGP_C3HHeJ_P0019238 |
AF-4 |
PF05110 |
1.3e-129 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Aff3-001 |
MGP_C3HHeJ_T0019237 |
5863 |
1229aa |
MGP_C3HHeJ_P0019237"/note="transcript_id=MGP_C3HHeJ_T0019237 |
- |
MGP_C3HHeJ_T0019238 |
6016 |
1228aa |
MGP_C3HHeJ_P0019238"/note="transcript_id=MGP_C3HHeJ_T0019238 |
- |
MGP_C3HHeJ_T0019239 |
3765 |
1254aa |
MGP_C3HHeJ_P0019239"/note="transcript_id=MGP_C3HHeJ_T0019239 |
- |
MGP_C3HHeJ_T0019240 |
761 |
No protein |
- |
- |
MGP_C3HHeJ_T0019241 |
1646 |
No protein |
- |
- |
MGP_C3HHeJ_T0019242 |
665 |
53aa |
MGP_C3HHeJ_P0019242"/note="transcript_id=MGP_C3HHeJ_T0019242 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0095825 | 51.5723 | 35.7704 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 53.3767 | 37.022 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0028769 | 51.0345 | 35.7759 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 48.1692 | 33.7673 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0072573 | 47.6346 | 32.5449 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 47.5183 | 32.4654 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.8373 | 99.8373 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0019482 | 99.8373 | 99.8373 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 98.8609 | 97.9658 | mus_caroli | MGP_CAROLIEiJ_P0017272 | 98.7805 | 97.8862 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0019459 | 100 | 100 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.8373 | 99.8373 | mus_musculus_balbcj | MGP_BALBcJ_P0019407 | 99.8373 | 99.8373 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.5118 | 99.0236 | mus_musculus_pwkphj | MGP_PWKPhJ_P0018496 | 99.5118 | 99.0236 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0018831 | 100 | 100 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 97.0708 | 95.1993 | rattus_norvegicus | ENSRNOP00000072037 | 93.4953 | 91.6928 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.8373 | 99.8373 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0019908 | 99.8373 | 99.8373 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.1863 | 98.5354 | mus_spretus | MGP_SPRETEiJ_P0018272 | 99.429 | 98.7765 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 98.9422 | 98.2099 | mus_spicilegus | ENSMSIP00000026061 | 99.4276 | 98.6917 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.8373 | 99.8373 | mus_musculus_dba2j | MGP_DBA2J_P0019304 | 99.8373 | 99.8373 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.8373 | 99.8373 | mus_musculus_akrj | MGP_AKRJ_P0019418 | 99.8373 | 99.8373 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 98.2913 | 97.2335 | mus_pahari | MGP_PahariEiJ_P0072620 | 98.6122 | 97.551 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.8373 | 99.8373 | mus_musculus_lpj | MGP_LPJ_P0019393 | 99.8373 | 99.8373 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.7559 | 99.6745 | mus_musculus_fvbnj | MGP_FVBNJ_P0019312 | 99.7559 | 99.6745 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0019279 | 100 | 100 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.7559 | 99.7559 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0019962 | 99.7559 | 99.7559 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.5118 | 99.4304 | mus_musculus_casteij | MGP_CASTEiJ_P0018743 | 99.5118 | 99.4304 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.8373 | 99.8373 | mus_musculus_cbaj | MGP_CBAJ_P0019190 | 99.8373 | 99.8373 |
MGP_C3HHeJ_G0015721 | mus_musculus_c3hhej | MGP_C3HHeJ_P0019237 | 99.7559 | 99.7559 | mus_musculus | ENSMUSP00000159147 | 97.7671 | 97.7671 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |