Description

Ensembl ID MGP_C3HHeJ_G0015721 Gene ID Accession -
Symbol Aff3 Alias - Full Name AF4/FMR2 family, member 3
Status Confidence Length 506971 bases Strand Minus strand
Position 1 : 36550505 - 37057475 RNA binding domain AF-4
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_C3HHeJ_P0019237 AF-4 PF05110 1.2e-130 1
MGP_C3HHeJ_P0019237 AF-4 PF05110 1.2e-130 2
MGP_C3HHeJ_P0019239 AF-4 PF05110 1.3e-130 1
MGP_C3HHeJ_P0019239 AF-4 PF05110 1.3e-130 2
MGP_C3HHeJ_P0019238 AF-4 PF05110 1.3e-129 1
MGP_C3HHeJ_P0019238 AF-4 PF05110 1.3e-129 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Aff3-001 MGP_C3HHeJ_T0019237 5863 1229aa MGP_C3HHeJ_P0019237"/note="transcript_id=MGP_C3HHeJ_T0019237
- MGP_C3HHeJ_T0019238 6016 1228aa MGP_C3HHeJ_P0019238"/note="transcript_id=MGP_C3HHeJ_T0019238
- MGP_C3HHeJ_T0019239 3765 1254aa MGP_C3HHeJ_P0019239"/note="transcript_id=MGP_C3HHeJ_T0019239
- MGP_C3HHeJ_T0019240 761 No protein -
- MGP_C3HHeJ_T0019241 1646 No protein -
- MGP_C3HHeJ_T0019242 665 53aa MGP_C3HHeJ_P0019242"/note="transcript_id=MGP_C3HHeJ_T0019242

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P009582551.572335.7704mus_musculus_c3hhejMGP_C3HHeJ_P001923753.376737.022
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P002876951.034535.7759mus_musculus_c3hhejMGP_C3HHeJ_P001923748.169233.7673
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P007257347.634632.5449mus_musculus_c3hhejMGP_C3HHeJ_P001923747.518332.4654

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.837399.8373mus_musculus_129s1svimjMGP_129S1SvImJ_P001948299.837399.8373
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923798.860997.9658mus_caroliMGP_CAROLIEiJ_P001727298.780597.8862
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P0019237100100mus_musculus_ajMGP_AJ_P0019459100100
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.837399.8373mus_musculus_balbcjMGP_BALBcJ_P001940799.837399.8373
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.511899.0236mus_musculus_pwkphjMGP_PWKPhJ_P001849699.511899.0236
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P0019237100100mus_musculus_wsbeijMGP_WSBEiJ_P0018831100100
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923797.070895.1993rattus_norvegicusENSRNOP0000007203793.495391.6928
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.837399.8373mus_musculus_c57bl6njMGP_C57BL6NJ_P001990899.837399.8373
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.186398.5354mus_spretusMGP_SPRETEiJ_P001827299.42998.7765
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923798.942298.2099mus_spicilegusENSMSIP0000002606199.427698.6917
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.837399.8373mus_musculus_dba2jMGP_DBA2J_P001930499.837399.8373
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.837399.8373mus_musculus_akrjMGP_AKRJ_P001941899.837399.8373
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923798.291397.2335mus_pahariMGP_PahariEiJ_P007262098.612297.551
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.837399.8373mus_musculus_lpjMGP_LPJ_P001939399.837399.8373
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.755999.6745mus_musculus_fvbnjMGP_FVBNJ_P001931299.755999.6745
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P0019237100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0019279100100
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.755999.7559mus_musculus_nzohlltjMGP_NZOHlLtJ_P001996299.755999.7559
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.511899.4304mus_musculus_casteijMGP_CASTEiJ_P001874399.511899.4304
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.837399.8373mus_musculus_cbajMGP_CBAJ_P001919099.837399.8373
MGP_C3HHeJ_G0015721mus_musculus_c3hhejMGP_C3HHeJ_P001923799.755999.7559mus_musculusENSMUSP0000015914797.767197.7671

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression