RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_BALBcJ_G0034503 | Gene ID |
|
Accession |
- |
Symbol |
Rpusd4 |
Alias |
- |
Full Name |
RNA pseudouridylate synthase domain containing 4 |
Status |
Confidence |
Length |
9739 bases |
Strand |
Plus strand |
Position |
9 : 32132865 - 32142603 |
RNA binding domain |
PseudoU_synth_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_BALBcJ_P0091677 |
PseudoU_synth_2 |
PF00849 |
4.1e-34 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rpusd4-001 |
MGP_BALBcJ_T0091677 |
1821 |
377aa |
MGP_BALBcJ_P0091677"/note="transcript_id=MGP_BALBcJ_T0091677 |
- |
MGP_BALBcJ_T0091678 |
801 |
No protein |
- |
- |
MGP_BALBcJ_T0091679 |
495 |
No protein |
- |
- |
MGP_BALBcJ_T0091680 |
508 |
34aa |
MGP_BALBcJ_P0091680"/note="transcript_id=MGP_BALBcJ_T0091680 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 34.6405 | 21.8954 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 28.1167 | 17.7719 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 49.1279 | 30.5233 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 44.8276 | 27.8515 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0056815 | 27.8481 | 17.5407 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 40.8488 | 25.7294 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 98.6737 | 97.6127 | mus_caroli | MGP_CAROLIEiJ_P0087204 | 98.6737 | 97.6127 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0091680 | 100 | 100 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 99.4695 | 98.939 | mus_musculus_lpj | MGP_LPJ_P0091412 | 99.4695 | 98.939 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0091693 | 100 | 100 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0092200 | 100 | 100 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 99.4695 | 98.6737 | mus_spicilegus | ENSMSIP00000010452 | 99.4695 | 98.6737 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0091245 | 100 | 100 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0091254 | 100 | 100 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0091395 | 100 | 100 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0091230 | 100 | 100 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0091750 | 100 | 100 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 95.2255 | 92.5729 | rattus_norvegicus | ENSRNOP00000015670 | 95.2255 | 92.5729 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 100 | 99.2042 | mus_musculus_casteij | MGP_CASTEiJ_P0091843 | 100 | 99.2042 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0090286 | 100 | 100 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 98.939 | 98.4085 | mus_spretus | MGP_SPRETEiJ_P0090766 | 98.939 | 98.4085 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0091185 | 100 | 100 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 97.3475 | 95.756 | mus_pahari | MGP_PahariEiJ_P0022856 | 97.3475 | 95.756 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 99.4695 | 98.939 | mus_musculus_pwkphj | MGP_PWKPhJ_P0091283 | 99.4695 | 98.939 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 100 | 100 | mus_musculus | ENSMUSP00000034543 | 100 | 100 |
MGP_BALBcJ_G0034503 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 99.4695 | 98.939 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0092518 | 99.4695 | 98.939 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |