Description

Ensembl ID MGP_BALBcJ_G0034503 Gene ID Accession -
Symbol Rpusd4 Alias - Full Name RNA pseudouridylate synthase domain containing 4
Status Confidence Length 9739 bases Strand Plus strand
Position 9 : 32132865 - 32142603 RNA binding domain PseudoU_synth_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0091677 PseudoU_synth_2 PF00849 4.1e-34 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rpusd4-001 MGP_BALBcJ_T0091677 1821 377aa MGP_BALBcJ_P0091677"/note="transcript_id=MGP_BALBcJ_T0091677
- MGP_BALBcJ_T0091678 801 No protein -
- MGP_BALBcJ_T0091679 495 No protein -
- MGP_BALBcJ_T0091680 508 34aa MGP_BALBcJ_P0091680"/note="transcript_id=MGP_BALBcJ_T0091680

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P004614134.640521.8954mus_musculus_balbcjMGP_BALBcJ_P009167728.116717.7719
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P007933249.127930.5233mus_musculus_balbcjMGP_BALBcJ_P009167744.827627.8515
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P005681527.848117.5407mus_musculus_balbcjMGP_BALBcJ_P009167740.848825.7294

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P009167798.673797.6127mus_caroliMGP_CAROLIEiJ_P008720498.673797.6127
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P0091677100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0091680100100
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P009167799.469598.939mus_musculus_lpjMGP_LPJ_P009141299.469598.939
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P0091677100100mus_musculus_akrjMGP_AKRJ_P0091693100100
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P0091677100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0092200100100
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P009167799.469598.6737mus_spicilegusENSMSIP0000001045299.469598.6737
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P0091677100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0091245100100
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P0091677100100mus_musculus_c3hhejMGP_C3HHeJ_P0091254100100
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P0091677100100mus_musculus_dba2jMGP_DBA2J_P0091395100100
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P0091677100100mus_musculus_fvbnjMGP_FVBNJ_P0091230100100
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P0091677100100mus_musculus_ajMGP_AJ_P0091750100100
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P009167795.225592.5729rattus_norvegicusENSRNOP0000001567095.225592.5729
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P009167710099.2042mus_musculus_casteijMGP_CASTEiJ_P009184310099.2042
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P0091677100100mus_musculus_wsbeijMGP_WSBEiJ_P0090286100100
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P009167798.93998.4085mus_spretusMGP_SPRETEiJ_P009076698.93998.4085
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P0091677100100mus_musculus_cbajMGP_CBAJ_P0091185100100
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P009167797.347595.756mus_pahariMGP_PahariEiJ_P002285697.347595.756
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P009167799.469598.939mus_musculus_pwkphjMGP_PWKPhJ_P009128399.469598.939
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P0091677100100mus_musculusENSMUSP00000034543100100
MGP_BALBcJ_G0034503mus_musculus_balbcjMGP_BALBcJ_P009167799.469598.939mus_musculus_nzohlltjMGP_NZOHlLtJ_P009251899.469598.939

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression