Description

Ensembl ID MGP_BALBcJ_G0031102 Gene ID Accession -
Symbol Rpusd3 Alias - Full Name RNA pseudouridylate synthase domain containing 3
Status Confidence Length 3994 bases Strand Minus strand
Position 6 : 111438313 - 111442306 RNA binding domain PseudoU_synth_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0079335 PseudoU_synth_2 PF00849 3.7e-18 1
MGP_BALBcJ_P0079334 PseudoU_synth_2 PF00849 5.5e-18 1
MGP_BALBcJ_P0079332 PseudoU_synth_2 PF00849 6.8e-18 1
MGP_BALBcJ_P0079337 PseudoU_synth_2 PF00849 1.2e-06 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rpusd3-001 MGP_BALBcJ_T0079332 1228 344aa MGP_BALBcJ_P0079332"/note="transcript_id=MGP_BALBcJ_T0079332
- MGP_BALBcJ_T0079333 321 No protein -
- MGP_BALBcJ_T0079334 1045 315aa MGP_BALBcJ_P0079334"/note="transcript_id=MGP_BALBcJ_T0079334
- MGP_BALBcJ_T0079335 805 268aa MGP_BALBcJ_P0079335"/note="transcript_id=MGP_BALBcJ_T0079335
- MGP_BALBcJ_T0079336 782 No protein -
- MGP_BALBcJ_T0079337 549 182aa MGP_BALBcJ_P0079337"/note="transcript_id=MGP_BALBcJ_T0079337
- MGP_BALBcJ_T0079338 522 No protein -
- MGP_BALBcJ_T0079339 365 117aa MGP_BALBcJ_P0079339"/note="transcript_id=MGP_BALBcJ_T0079339
- MGP_BALBcJ_T0079340 752 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P004614131.372518.3007mus_musculus_balbcjMGP_BALBcJ_P007933227.90716.2791
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P009167744.827627.8515mus_musculus_balbcjMGP_BALBcJ_P007933249.127930.5233
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P005681521.338212.2966mus_musculus_balbcjMGP_BALBcJ_P007933234.302319.7674

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P007933297.965196.2209mus_caroliMGP_CAROLIEiJ_P007541797.965196.2209
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0079317100100
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculus_lpjMGP_LPJ_P0079100100100
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculus_akrjMGP_AKRJ_P0079310100100
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0079805100100
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P007933298.546598.2558mus_spicilegusENSMSIP0000003196379.205678.972
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0078957100100
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculus_c3hhejMGP_C3HHeJ_P0077961100100
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculus_dba2jMGP_DBA2J_P0079068100100
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculus_fvbnjMGP_FVBNJ_P0078952100100
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculus_ajMGP_AJ_P0079389100100
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P007933286.627982.5581rattus_norvegicusENSRNOP0000005950393.12588.75
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P007933299.418699.4186mus_musculus_casteijMGP_CASTEiJ_P007953899.418699.4186
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculus_wsbeijMGP_WSBEiJ_P0078060100100
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P007933298.546598.2558mus_spretusMGP_SPRETEiJ_P007848498.546598.2558
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculus_cbajMGP_CBAJ_P0078916100100
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P007933296.511693.314mus_pahariMGP_PahariEiJ_P005161696.511693.314
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P007933299.418699.4186mus_musculus_pwkphjMGP_PWKPhJ_P007896799.418699.4186
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculusENSMUSP00000108715100100
MGP_BALBcJ_G0031102mus_musculus_balbcjMGP_BALBcJ_P0079332100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0080054100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression