RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_BALBcJ_G0031102 | Gene ID |
|
Accession |
- |
Symbol |
Rpusd3 |
Alias |
- |
Full Name |
RNA pseudouridylate synthase domain containing 3 |
Status |
Confidence |
Length |
3994 bases |
Strand |
Minus strand |
Position |
6 : 111438313 - 111442306 |
RNA binding domain |
PseudoU_synth_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_BALBcJ_P0079335 |
PseudoU_synth_2 |
PF00849 |
3.7e-18 |
1 |
MGP_BALBcJ_P0079334 |
PseudoU_synth_2 |
PF00849 |
5.5e-18 |
1 |
MGP_BALBcJ_P0079332 |
PseudoU_synth_2 |
PF00849 |
6.8e-18 |
1 |
MGP_BALBcJ_P0079337 |
PseudoU_synth_2 |
PF00849 |
1.2e-06 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rpusd3-001 |
MGP_BALBcJ_T0079332 |
1228 |
344aa |
MGP_BALBcJ_P0079332"/note="transcript_id=MGP_BALBcJ_T0079332 |
- |
MGP_BALBcJ_T0079333 |
321 |
No protein |
- |
- |
MGP_BALBcJ_T0079334 |
1045 |
315aa |
MGP_BALBcJ_P0079334"/note="transcript_id=MGP_BALBcJ_T0079334 |
- |
MGP_BALBcJ_T0079335 |
805 |
268aa |
MGP_BALBcJ_P0079335"/note="transcript_id=MGP_BALBcJ_T0079335 |
- |
MGP_BALBcJ_T0079336 |
782 |
No protein |
- |
- |
MGP_BALBcJ_T0079337 |
549 |
182aa |
MGP_BALBcJ_P0079337"/note="transcript_id=MGP_BALBcJ_T0079337 |
- |
MGP_BALBcJ_T0079338 |
522 |
No protein |
- |
- |
MGP_BALBcJ_T0079339 |
365 |
117aa |
MGP_BALBcJ_P0079339"/note="transcript_id=MGP_BALBcJ_T0079339 |
- |
MGP_BALBcJ_T0079340 |
752 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 31.3725 | 18.3007 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 27.907 | 16.2791 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 44.8276 | 27.8515 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 49.1279 | 30.5233 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0056815 | 21.3382 | 12.2966 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 34.3023 | 19.7674 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 97.9651 | 96.2209 | mus_caroli | MGP_CAROLIEiJ_P0075417 | 97.9651 | 96.2209 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0079317 | 100 | 100 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0079100 | 100 | 100 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0079310 | 100 | 100 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0079805 | 100 | 100 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 98.5465 | 98.2558 | mus_spicilegus | ENSMSIP00000031963 | 79.2056 | 78.972 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0078957 | 100 | 100 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0077961 | 100 | 100 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0079068 | 100 | 100 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0078952 | 100 | 100 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0079389 | 100 | 100 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 86.6279 | 82.5581 | rattus_norvegicus | ENSRNOP00000059503 | 93.125 | 88.75 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 99.4186 | 99.4186 | mus_musculus_casteij | MGP_CASTEiJ_P0079538 | 99.4186 | 99.4186 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0078060 | 100 | 100 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 98.5465 | 98.2558 | mus_spretus | MGP_SPRETEiJ_P0078484 | 98.5465 | 98.2558 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0078916 | 100 | 100 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 96.5116 | 93.314 | mus_pahari | MGP_PahariEiJ_P0051616 | 96.5116 | 93.314 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 99.4186 | 99.4186 | mus_musculus_pwkphj | MGP_PWKPhJ_P0078967 | 99.4186 | 99.4186 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus | ENSMUSP00000108715 | 100 | 100 |
MGP_BALBcJ_G0031102 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0080054 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |