Description

Ensembl ID MGP_BALBcJ_G0029204 Gene ID Accession -
Symbol Ssu72 Alias - Full Name Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
Status Confidence Length 32688 bases Strand Plus strand
Position 4 : 153791217 - 153823904 RNA binding domain Ssu72
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0069801 Ssu72 PF04722 1.3e-91 1
MGP_BALBcJ_P0069803 Ssu72 PF04722 5.3e-81 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Ssu72-001 MGP_BALBcJ_T0069801 1471 194aa MGP_BALBcJ_P0069801"/note="transcript_id=MGP_BALBcJ_T0069801
- MGP_BALBcJ_T0069802 1539 No protein -
- MGP_BALBcJ_T0069803 874 182aa MGP_BALBcJ_P0069803"/note="transcript_id=MGP_BALBcJ_T0069803

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0029204

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P006980199.484599.4845mus_caroliMGP_CAROLIEiJ_P006633399.484599.4845
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0069815100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_lpjMGP_LPJ_P0069615100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_akrjMGP_AKRJ_P0069789100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0070286100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P006980199.484599.4845mus_spicilegusENSMSIP0000001732899.484599.4845
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0069461100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_c3hhejMGP_C3HHeJ_P0069459100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_dba2jMGP_DBA2J_P0069533100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_fvbnjMGP_FVBNJ_P0069442100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_ajMGP_AJ_P0069881100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P006980199.484599.4845rattus_norvegicusENSRNOP0000002434999.484599.4845
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_casteijMGP_CASTEiJ_P0069973100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_wsbeijMGP_WSBEiJ_P0068621100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P006980199.484599.4845mus_spretusMGP_SPRETEiJ_P006892199.484599.4845
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_cbajMGP_CBAJ_P0069396100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P006980199.484599.4845mus_pahariMGP_PahariEiJ_P008143699.484599.4845
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_pwkphjMGP_PWKPhJ_P0069446100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculusENSMUSP00000030905100100
MGP_BALBcJ_G0029204mus_musculus_balbcjMGP_BALBcJ_P0069801100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0070479100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression