Description

Ensembl ID MGP_BALBcJ_G0026456 Gene ID Accession -
Symbol Zc3h6 Alias - Full Name zinc finger CCCH type containing 6
Status Confidence Length 50945 bases Strand Plus strand
Position 2 : 127233824 - 127284768 RNA binding domain zf-CCCH , zf-CCCH_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0057545 zf-CCCH PF00642 5.7e-11 1
MGP_BALBcJ_P0057545 zf-CCCH PF00642 5.7e-11 2
MGP_BALBcJ_P0057545 zf-CCCH_2 PF14608 3.4e-10 3
MGP_BALBcJ_P0057545 zf-CCCH_2 PF14608 3.4e-10 4
MGP_BALBcJ_P0057545 zf-CCCH_2 PF14608 3.4e-10 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Zc3h6-001 MGP_BALBcJ_T0057545 4916 1177aa MGP_BALBcJ_P0057545"/note="transcript_id=MGP_BALBcJ_T0057545
- MGP_BALBcJ_T0057546 1484 151aa MGP_BALBcJ_P0057546"/note="transcript_id=MGP_BALBcJ_T0057546

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P008179848.525934.502mus_musculus_balbcjMGP_BALBcJ_P005754551.741736.7884
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754360.655742.623mus_musculus_balbcjMGP_BALBcJ_P005754515.717911.045

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754597.366295.9218mus_caroliMGP_CAROLIEiJ_P005452097.781696.3311
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754510099.915mus_musculus_129s1svimjMGP_129S1SvImJ_P005757310099.915
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754510099.915mus_musculus_lpjMGP_LPJ_P005744010099.915
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754510099.915mus_musculus_akrjMGP_AKRJ_P005755510099.915
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754510099.915mus_musculus_c57bl6njMGP_C57BL6NJ_P005801710099.915
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754598.215897.791mus_spicilegusENSMSIP0000002116899.142498.7136
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754510099.915mus_musculus_nodshiltjMGP_NODShiLtJ_P005725210099.915
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P0057545100100mus_musculus_c3hhejMGP_C3HHeJ_P0057236100100
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754599.235398.9805mus_musculus_dba2jMGP_DBA2J_P005730599.235398.9805
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754510099.915mus_musculus_fvbnjMGP_FVBNJ_P005728210099.915
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754510099.915mus_musculus_ajMGP_AJ_P005760610099.915
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754595.49791.8437rattus_norvegicusENSRNOP0000002432295.254291.6102
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754510099.915mus_musculus_casteijMGP_CASTEiJ_P005747810099.915
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754510099.915mus_musculus_wsbeijMGP_WSBEiJ_P005653610099.915
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754598.980598.5556mus_spretusMGP_SPRETEiJ_P005662898.980598.5556
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P0057545100100mus_musculus_cbajMGP_CBAJ_P0057208100100
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754596.686594.6474mus_pahariMGP_PahariEiJ_P006549896.768794.7279
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754599.490299.2353mus_musculus_pwkphjMGP_PWKPhJ_P005706599.490299.2353
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754510099.915mus_musculusENSMUSP0000010594910099.915
MGP_BALBcJ_G0026456mus_musculus_balbcjMGP_BALBcJ_P005754510099.915mus_musculus_nzohlltjMGP_NZOHlLtJ_P005818310099.915

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression