Description

Ensembl ID MGP_BALBcJ_G0026454 Gene ID Accession -
Symbol Zc3h8 Alias - Full Name zinc finger CCCH type containing 8
Status Confidence Length 18022 bases Strand Minus strand
Position 2 : 127195064 - 127213085 RNA binding domain zf-CCCH , zf-CCCH_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0057543 zf-CCCH PF00642 7.6e-11 1
MGP_BALBcJ_P0057543 zf-CCCH PF00642 7.6e-11 2
MGP_BALBcJ_P0057543 zf-CCCH_2 PF14608 1.7e-10 3
MGP_BALBcJ_P0057543 zf-CCCH_2 PF14608 1.7e-10 4
MGP_BALBcJ_P0057543 zf-CCCH_2 PF14608 1.7e-10 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Zc3h8-001 MGP_BALBcJ_T0057543 1636 305aa MGP_BALBcJ_P0057543"/note="transcript_id=MGP_BALBcJ_T0057543

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P005754515.717911.045mus_musculus_balbcjMGP_BALBcJ_P005754360.655742.623
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P008179811.95227.33068mus_musculus_balbcjMGP_BALBcJ_P005754349.180330.1639

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P005754398.032897.7049mus_caroliMGP_CAROLIEiJ_P005451898.032897.7049
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0057571100100
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculus_lpjMGP_LPJ_P0057438100100
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculus_akrjMGP_AKRJ_P0057553100100
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0058015100100
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P005754391.803390.4918mus_spicilegusENSMSIP0000002124794.915393.5593
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0057250100100
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculus_c3hhejMGP_C3HHeJ_P0057234100100
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P005754310099.6721mus_musculus_dba2jMGP_DBA2J_P005730310099.6721
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculus_fvbnjMGP_FVBNJ_P0057280100100
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculus_ajMGP_AJ_P0057604100100
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P005754391.147589.1803rattus_norvegicusENSRNOP0000002384591.147589.1803
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculus_casteijMGP_CASTEiJ_P0057476100100
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculus_wsbeijMGP_WSBEiJ_P0056534100100
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P005754399.344399.3443mus_spretusMGP_SPRETEiJ_P005662699.344399.3443
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculus_cbajMGP_CBAJ_P0057206100100
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P005754397.377197.3771mus_pahariMGP_PahariEiJ_P006549697.377197.3771
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P005754310099.6721mus_musculus_pwkphjMGP_PWKPhJ_P005706310099.6721
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculusENSMUSP00000028866100100
MGP_BALBcJ_G0026454mus_musculus_balbcjMGP_BALBcJ_P0057543100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0058181100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression