RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_BALBcJ_G0026454 | Gene ID |
|
Accession |
- |
Symbol |
Zc3h8 |
Alias |
- |
Full Name |
zinc finger CCCH type containing 8 |
Status |
Confidence |
Length |
18022 bases |
Strand |
Minus strand |
Position |
2 : 127195064 - 127213085 |
RNA binding domain |
zf-CCCH , zf-CCCH_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_BALBcJ_P0057543 |
zf-CCCH |
PF00642 |
7.6e-11 |
1 |
MGP_BALBcJ_P0057543 |
zf-CCCH |
PF00642 |
7.6e-11 |
2 |
MGP_BALBcJ_P0057543 |
zf-CCCH_2 |
PF14608 |
1.7e-10 |
3 |
MGP_BALBcJ_P0057543 |
zf-CCCH_2 |
PF14608 |
1.7e-10 |
4 |
MGP_BALBcJ_P0057543 |
zf-CCCH_2 |
PF14608 |
1.7e-10 |
5 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Zc3h8-001 |
MGP_BALBcJ_T0057543 |
1636 |
305aa |
MGP_BALBcJ_P0057543"/note="transcript_id=MGP_BALBcJ_T0057543 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057545 | 15.7179 | 11.045 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 60.6557 | 42.623 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0081798 | 11.9522 | 7.33068 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 49.1803 | 30.1639 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 98.0328 | 97.7049 | mus_caroli | MGP_CAROLIEiJ_P0054518 | 98.0328 | 97.7049 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0057571 | 100 | 100 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0057438 | 100 | 100 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0057553 | 100 | 100 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0058015 | 100 | 100 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 91.8033 | 90.4918 | mus_spicilegus | ENSMSIP00000021247 | 94.9153 | 93.5593 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0057250 | 100 | 100 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0057234 | 100 | 100 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 99.6721 | mus_musculus_dba2j | MGP_DBA2J_P0057303 | 100 | 99.6721 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0057280 | 100 | 100 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0057604 | 100 | 100 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 91.1475 | 89.1803 | rattus_norvegicus | ENSRNOP00000023845 | 91.1475 | 89.1803 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0057476 | 100 | 100 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0056534 | 100 | 100 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 99.3443 | 99.3443 | mus_spretus | MGP_SPRETEiJ_P0056626 | 99.3443 | 99.3443 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0057206 | 100 | 100 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 97.3771 | 97.3771 | mus_pahari | MGP_PahariEiJ_P0065496 | 97.3771 | 97.3771 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 99.6721 | mus_musculus_pwkphj | MGP_PWKPhJ_P0057063 | 100 | 99.6721 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus | ENSMUSP00000028866 | 100 | 100 |
MGP_BALBcJ_G0026454 | mus_musculus_balbcj | MGP_BALBcJ_P0057543 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0058181 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |