Description

Ensembl ID MGP_BALBcJ_G0025602 Gene ID Accession -
Symbol Rpl12 Alias - Full Name ribosomal protein L12
Status Confidence Length 2938 bases Strand Plus strand
Position 2 : 30239956 - 30242893 RNA binding domain Ribosomal_L11 , Ribosomal_L11_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0054211 Ribosomal_L11 PF00298 1.6e-14 1
MGP_BALBcJ_P0054211 Ribosomal_L11_N PF03946 7.6e-20 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rpl12-001 MGP_BALBcJ_T0054211 1242 165aa MGP_BALBcJ_P0054211"/note="transcript_id=MGP_BALBcJ_T0054211
- MGP_BALBcJ_T0054212 2863 No protein -
- MGP_BALBcJ_T0054213 1417 No protein -
- MGP_BALBcJ_T0054214 756 No protein -
- MGP_BALBcJ_T0054215 600 No protein -
- MGP_BALBcJ_T0054216 729 84aa MGP_BALBcJ_P0054216"/note="transcript_id=MGP_BALBcJ_T0054216
- MGP_BALBcJ_T0054217 489 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P004843595.09292.638mus_musculus_balbcjMGP_BALBcJ_P005421193.939491.5152
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P005045136.979218.75mus_musculus_balbcjMGP_BALBcJ_P005421143.030321.8182

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_caroliMGP_CAROLIEiJ_P0051241100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0054249100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P005421192.121291.5152mus_musculus_lpjMGP_LPJ_P005409963.070562.6556
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P005421195.757695.7576mus_musculus_akrjMGP_AKRJ_P005422594.047694.0476
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0054693100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_spicilegusENSMSIP00000010906100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0053947100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_musculus_c3hhejMGP_C3HHeJ_P0053939100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_musculus_dba2jMGP_DBA2J_P0053996100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_musculus_fvbnjMGP_FVBNJ_P0053954100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P005421195.151595.1515mus_musculus_ajMGP_AJ_P005426393.452493.4524
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P005421198.787996.9697rattus_norvegicusENSRNOP0000007149298.787996.9697
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P005421110098.7879rattus_norvegicusENSRNOP0000004146210098.7879
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P005421189.69788.4848rattus_norvegicusENSRNOP000000304377473
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P005421176.969774.5455rattus_norvegicusENSRNOP0000008405294.074191.1111
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P005421199.393998.1818rattus_norvegicusENSRNOP0000002172593.181892.0455
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P005421174.545573.3333rattus_norvegicusENSRNOP0000007759998.496.8
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P005421198.787996.9697rattus_norvegicusENSRNOP0000008606184.020682.4742
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_musculus_casteijMGP_CASTEiJ_P0054111100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_musculus_wsbeijMGP_WSBEiJ_P0053213100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_spretusMGP_SPRETEiJ_P0053284100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_musculus_cbajMGP_CBAJ_P0053888100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P005421110099.3939mus_pahariMGP_PahariEiJ_P006225610099.3939
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_musculus_pwkphjMGP_PWKPhJ_P005371997.058897.0588
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_musculusENSMUSP00000117461100100
MGP_BALBcJ_G0025602mus_musculus_balbcjMGP_BALBcJ_P0054211100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0054834100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression