Description

Ensembl ID MGP_BALBcJ_G0024248 Gene ID Accession -
Symbol Sra1 Alias - Full Name steroid receptor RNA activator 1
Status Confidence Length 12783 bases Strand Minus strand
Position 18 : 33889688 - 33902470 RNA binding domain SRA1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0049299 SRA1 PF07304 1.1e-67 1
MGP_BALBcJ_P0049302 SRA1 PF07304 3e-64 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Sra1-001 MGP_BALBcJ_T0049299 2360 232aa MGP_BALBcJ_P0049299"/note="transcript_id=MGP_BALBcJ_T0049299
- MGP_BALBcJ_T0049300 871 37aa MGP_BALBcJ_P0049300"/note="transcript_id=MGP_BALBcJ_T0049300
- MGP_BALBcJ_T0049301 997 No protein -
- MGP_BALBcJ_T0049302 695 222aa MGP_BALBcJ_P0049302"/note="transcript_id=MGP_BALBcJ_T0049302
- MGP_BALBcJ_T0049303 337 No protein -
- MGP_BALBcJ_T0049304 2061 486aa MGP_BALBcJ_P0049304"/note="transcript_id=MGP_BALBcJ_T0049304

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P007192736.973725.5263mus_musculus_balbcjMGP_BALBcJ_P004930457.818939.9177
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P008566738.16927.0423mus_musculus_balbcjMGP_BALBcJ_P004930455.761339.5062

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P004930499.588599.3827mus_caroliMGP_CAROLIEiJ_P004640799.588599.3827
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P0049304100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0049361100100
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P0049304100100mus_musculus_lpjMGP_LPJ_P0049188100100
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P0049304100100mus_musculus_akrjMGP_AKRJ_P0049301100100
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P004930499.794299.7942mus_musculus_c57bl6njMGP_C57BL6NJ_P004978999.794299.7942
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P004930499.794299.5885mus_spicilegusENSMSIP0000003801099.794299.5885
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P0049304100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0049040100100
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P0049304100100mus_musculus_c3hhejMGP_C3HHeJ_P0049042100100
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P0049304100100mus_musculus_dba2jMGP_DBA2J_P0049066100100
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P0049304100100mus_musculus_fvbnjMGP_FVBNJ_P0049038100100
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P0049304100100mus_musculus_ajMGP_AJ_P0049343100100
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P004930497.530996.7078rattus_norvegicusENSRNOP0000002431397.933997.1074
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P004930499.794299.7942mus_musculus_casteijMGP_CASTEiJ_P004914199.794299.7942
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P004930499.794299.7942mus_musculus_wsbeijMGP_WSBEiJ_P004833299.794299.7942
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P004930499.794299.5885mus_spretusMGP_SPRETEiJ_P004833299.794299.5885
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P0049304100100mus_musculus_cbajMGP_CBAJ_P0048969100100
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P004930493.827293.0041mus_pahariMGP_PahariEiJ_P003900698.064597.2043
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P004930499.794299.5885mus_musculus_pwkphjMGP_PWKPhJ_P004874199.794299.5885
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P004930499.794299.7942mus_musculusENSMUSP0000000141599.794299.7942
MGP_BALBcJ_G0024248mus_musculus_balbcjMGP_BALBcJ_P0049304100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0049895100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression