Description

Ensembl ID MGP_BALBcJ_G0023557 Gene ID Accession -
Symbol Dxo Alias - Full Name decapping exoribonuclease
Status Confidence Length 2183 bases Strand Plus strand
Position 17 : 33937619 - 33939801 RNA binding domain RAI1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0047151 RAI1 PF08652 6.8e-23 1
MGP_BALBcJ_P0047144 RAI1 PF08652 7.3e-22 1
MGP_BALBcJ_P0047142 RAI1 PF08652 9.7e-22 1
MGP_BALBcJ_P0047143 RAI1 PF08652 9.7e-22 1
MGP_BALBcJ_P0047150 RAI1 PF08652 9.1e-12 1
MGP_BALBcJ_P0047147 RAI1 PF08652 1.4e-11 1
MGP_BALBcJ_P0047152 RAI1 PF08652 6.4e-11 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Dxo-001 MGP_BALBcJ_T0047142 1447 397aa MGP_BALBcJ_P0047142"/note="transcript_id=MGP_BALBcJ_T0047142
- MGP_BALBcJ_T0047143 1519 397aa MGP_BALBcJ_P0047143"/note="transcript_id=MGP_BALBcJ_T0047143
- MGP_BALBcJ_T0047144 1117 304aa MGP_BALBcJ_P0047144"/note="transcript_id=MGP_BALBcJ_T0047144
- MGP_BALBcJ_T0047145 956 No protein -
- MGP_BALBcJ_T0047146 584 144aa MGP_BALBcJ_P0047146"/note="transcript_id=MGP_BALBcJ_T0047146
- MGP_BALBcJ_T0047147 738 245aa MGP_BALBcJ_P0047147"/note="transcript_id=MGP_BALBcJ_T0047147
- MGP_BALBcJ_T0047148 701 45aa MGP_BALBcJ_P0047148"/note="transcript_id=MGP_BALBcJ_T0047148
- MGP_BALBcJ_T0047149 427 60aa MGP_BALBcJ_P0047149"/note="transcript_id=MGP_BALBcJ_T0047149
- MGP_BALBcJ_T0047150 480 73aa MGP_BALBcJ_P0047150"/note="transcript_id=MGP_BALBcJ_T0047150
- MGP_BALBcJ_T0047151 583 118aa MGP_BALBcJ_P0047151"/note="transcript_id=MGP_BALBcJ_T0047151
- MGP_BALBcJ_T0047152 499 166aa MGP_BALBcJ_P0047152"/note="transcript_id=MGP_BALBcJ_T0047152

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0023557

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714399.244399.2443mus_caroliMGP_CAROLIEiJ_P004429599.244399.2443
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714399.748199.4962mus_musculus_129s1svimjMGP_129S1SvImJ_P004719799.748199.4962
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714399.748199.4962mus_musculus_lpjMGP_LPJ_P004701999.748199.4962
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714399.748199.4962mus_musculus_akrjMGP_AKRJ_P004713399.748199.4962
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714399.748199.4962mus_musculus_c57bl6njMGP_C57BL6NJ_P004761799.748199.4962
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714399.748199.7481mus_spicilegusENSMSIP0000003583770.967770.9677
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P0047143100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0046876100100
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714399.748199.4962mus_musculus_c3hhejMGP_C3HHeJ_P004686999.748199.4962
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P0047143100100mus_musculus_dba2jMGP_DBA2J_P0046919100100
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P0047143100100mus_musculus_fvbnjMGP_FVBNJ_P0046875100100
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P0047143100100mus_musculus_ajMGP_AJ_P0047188100100
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714398.740697.2292rattus_norvegicusENSRNOP0000000048398.740697.2292
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714399.496299.2443mus_musculus_casteijMGP_CASTEiJ_P004695499.496299.2443
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714398.740698.7406mus_musculus_wsbeijMGP_WSBEiJ_P004621398.740698.7406
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714399.496299.4962mus_spretusMGP_SPRETEiJ_P004619299.496299.4962
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714399.748199.4962mus_musculus_cbajMGP_CBAJ_P004680399.748199.4962
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714398.740698.4887mus_pahariMGP_PahariEiJ_P004383498.740698.4887
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714398.488798.2368mus_musculus_pwkphjMGP_PWKPhJ_P004654598.488798.2368
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714399.748199.4962mus_musculusENSMUSP0000004701899.748199.4962
MGP_BALBcJ_G0023557mus_musculus_balbcjMGP_BALBcJ_P004714399.496299.2443mus_musculus_nzohlltjMGP_NZOHlLtJ_P004771699.496299.2443

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression