RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_BALBcJ_G0023326 | Gene ID |
|
Accession |
- |
Symbol |
Rpusd1 |
Alias |
- |
Full Name |
RNA pseudouridylate synthase domain containing 1 |
Status |
Confidence |
Length |
3726 bases |
Strand |
Plus strand |
Position |
17 : 24324170 - 24327895 |
RNA binding domain |
PseudoU_synth_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_BALBcJ_P0046141 |
PseudoU_synth_2 |
PF00849 |
1e-24 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Rpusd1-201 |
MGP_BALBcJ_T0046141 |
1703 |
306aa |
MGP_BALBcJ_P0046141"/note="transcript_id=MGP_BALBcJ_T0046141 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0079332 | 27.907 | 16.2791 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 31.3725 | 18.3007 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0091677 | 28.1167 | 17.7719 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 34.6405 | 21.8954 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0056815 | 19.349 | 12.1157 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 34.9673 | 21.8954 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 99.0196 | 98.6928 | mus_caroli | MGP_CAROLIEiJ_P0043304 | 99.0196 | 98.6928 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0046202 | 100 | 100 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0046025 | 100 | 100 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0046130 | 100 | 100 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0046612 | 100 | 99.6732 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_spicilegus | ENSMSIP00000014920 | 100 | 99.6732 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0045864 | 100 | 99.6732 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_musculus_c3hhej | MGP_C3HHeJ_P0045872 | 100 | 99.6732 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_musculus_dba2j | MGP_DBA2J_P0045918 | 100 | 99.6732 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_musculus_fvbnj | MGP_FVBNJ_P0045892 | 100 | 99.6732 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_musculus_aj | MGP_AJ_P0046179 | 100 | 99.6732 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 99.3464 | 97.0588 | rattus_norvegicus | ENSRNOP00000015206 | 99.3464 | 97.0588 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 58.1699 | 57.1895 | mus_musculus_casteij | MGP_CASTEiJ_P0045976 | 95.6989 | 94.086 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_musculus_wsbeij | MGP_WSBEiJ_P0045245 | 100 | 99.6732 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_spretus | MGP_SPRETEiJ_P0045213 | 100 | 99.6732 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_musculus_cbaj | MGP_CBAJ_P0045805 | 100 | 99.6732 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 99.0196 | 97.7124 | mus_pahari | MGP_PahariEiJ_P0055607 | 98.3766 | 97.0779 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_musculus_pwkphj | MGP_PWKPhJ_P0045559 | 100 | 99.6732 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_musculus | ENSMUSP00000158547 | 100 | 99.6732 |
MGP_BALBcJ_G0023326 | mus_musculus_balbcj | MGP_BALBcJ_P0046141 | 100 | 99.6732 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0046709 | 100 | 99.6732 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |