Description

Ensembl ID MGP_BALBcJ_G0023326 Gene ID Accession -
Symbol Rpusd1 Alias - Full Name RNA pseudouridylate synthase domain containing 1
Status Confidence Length 3726 bases Strand Plus strand
Position 17 : 24324170 - 24327895 RNA binding domain PseudoU_synth_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0046141 PseudoU_synth_2 PF00849 1e-24 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rpusd1-201 MGP_BALBcJ_T0046141 1703 306aa MGP_BALBcJ_P0046141"/note="transcript_id=MGP_BALBcJ_T0046141

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P007933227.90716.2791mus_musculus_balbcjMGP_BALBcJ_P004614131.372518.3007
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P009167728.116717.7719mus_musculus_balbcjMGP_BALBcJ_P004614134.640521.8954
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P005681519.34912.1157mus_musculus_balbcjMGP_BALBcJ_P004614134.967321.8954

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614199.019698.6928mus_caroliMGP_CAROLIEiJ_P004330499.019698.6928
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P0046141100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0046202100100
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P0046141100100mus_musculus_lpjMGP_LPJ_P0046025100100
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P0046141100100mus_musculus_akrjMGP_AKRJ_P0046130100100
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_musculus_c57bl6njMGP_C57BL6NJ_P004661210099.6732
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_spicilegusENSMSIP0000001492010099.6732
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_musculus_nodshiltjMGP_NODShiLtJ_P004586410099.6732
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_musculus_c3hhejMGP_C3HHeJ_P004587210099.6732
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_musculus_dba2jMGP_DBA2J_P004591810099.6732
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_musculus_fvbnjMGP_FVBNJ_P004589210099.6732
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_musculus_ajMGP_AJ_P004617910099.6732
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614199.346497.0588rattus_norvegicusENSRNOP0000001520699.346497.0588
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614158.169957.1895mus_musculus_casteijMGP_CASTEiJ_P004597695.698994.086
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_musculus_wsbeijMGP_WSBEiJ_P004524510099.6732
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_spretusMGP_SPRETEiJ_P004521310099.6732
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_musculus_cbajMGP_CBAJ_P004580510099.6732
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614199.019697.7124mus_pahariMGP_PahariEiJ_P005560798.376697.0779
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_musculus_pwkphjMGP_PWKPhJ_P004555910099.6732
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_musculusENSMUSP0000015854710099.6732
MGP_BALBcJ_G0023326mus_musculus_balbcjMGP_BALBcJ_P004614110099.6732mus_musculus_nzohlltjMGP_NZOHlLtJ_P004670910099.6732

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression