Description

Ensembl ID MGP_BALBcJ_G0020920 Gene ID Accession -
Symbol Paip1 Alias - Full Name polyadenylate binding protein-interacting protein 1
Status Confidence Length 28970 bases Strand Plus strand
Position 13 : 118161740 - 118190709 RNA binding domain PAM2 , MIF4G
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0038210 PAM2 PF07145 7.2e-05 1
MGP_BALBcJ_P0038210 MIF4G PF02854 1.4e-24 2
MGP_BALBcJ_P0038207 PAM2 PF07145 0.0001 1
MGP_BALBcJ_P0038207 MIF4G PF02854 3.7e-15 2
MGP_BALBcJ_P0038209 PAM2 PF07145 0.00017 1
MGP_BALBcJ_P0038209 MIF4G PF02854 8.8e-39 2
MGP_BALBcJ_P0038206 PAM2 PF07145 0.00017 1
MGP_BALBcJ_P0038206 MIF4G PF02854 9.5e-39 2
MGP_BALBcJ_P0038208 PAM2 PF07145 0.00021 1
MGP_BALBcJ_P0038208 MIF4G PF02854 1.6e-38 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Paip1-001 MGP_BALBcJ_T0038206 2532 400aa MGP_BALBcJ_P0038206"/note="transcript_id=MGP_BALBcJ_T0038206
- MGP_BALBcJ_T0038207 1576 275aa MGP_BALBcJ_P0038207"/note="transcript_id=MGP_BALBcJ_T0038207
- MGP_BALBcJ_T0038208 1455 484aa MGP_BALBcJ_P0038208"/note="transcript_id=MGP_BALBcJ_T0038208
- MGP_BALBcJ_T0038209 1214 403aa MGP_BALBcJ_P0038209"/note="transcript_id=MGP_BALBcJ_T0038209
- MGP_BALBcJ_T0038210 621 206aa MGP_BALBcJ_P0038210"/note="transcript_id=MGP_BALBcJ_T0038210
- MGP_BALBcJ_T0038211 568 189aa MGP_BALBcJ_P0038211"/note="transcript_id=MGP_BALBcJ_T0038211
- MGP_BALBcJ_T0038212 838 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003343341.441420.7207mus_musculus_balbcjMGP_BALBcJ_P003820819.00839.50413
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P005004028.892515.0883mus_musculus_balbcjMGP_BALBcJ_P003820837.190119.4215

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003820897.933997.9339mus_caroliMGP_CAROLIEiJ_P003555598.136698.1366
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003820899.793499.7934mus_musculus_129s1svimjMGP_129S1SvImJ_P003825399.587699.5876
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003820899.793499.7934mus_musculus_lpjMGP_LPJ_P003813499.587699.5876
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P0038208100100mus_musculus_akrjMGP_AKRJ_P0038161100100
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P0038208100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0038669100100
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P0038208100100mus_spicilegusENSMSIP0000001572499.793899.7938
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P0038208100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0037968100100
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003820899.793499.7934mus_musculus_c3hhejMGP_C3HHeJ_P003795999.587699.5876
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003820899.793499.7934mus_musculus_dba2jMGP_DBA2J_P003801399.587699.5876
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P0038208100100mus_musculus_fvbnjMGP_FVBNJ_P0037985100100
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P0038208100100mus_musculus_ajMGP_AJ_P0038203100100
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003820853.305846.6942rattus_norvegicusENSRNOP0000008189279.876269.969
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P0038208100100mus_musculus_casteijMGP_CASTEiJ_P0037949100100
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003820898.760398.7603mus_musculus_wsbeijMGP_WSBEiJ_P0037365100100
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003820899.586899.5868mus_spretusMGP_SPRETEiJ_P003723799.17799.177
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003820899.793499.7934mus_musculus_cbajMGP_CBAJ_P003787099.587699.5876
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003820890.909190.4959mus_pahariMGP_PahariEiJ_P002720397.995597.5501
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003820899.173699.1736mus_musculus_pwkphjMGP_PWKPhJ_P003757799.378999.3789
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P0038208100100mus_musculusENSMUSP00000117256100100
MGP_BALBcJ_G0020920mus_musculus_balbcjMGP_BALBcJ_P003820899.793499.7934mus_musculus_nzohlltjMGP_NZOHlLtJ_P003871699.587699.5876

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression