RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_BALBcJ_G0020522 | Gene ID |
|
Accession |
- |
Symbol |
Nop16 |
Alias |
- |
Full Name |
NOP16 nucleolar protein |
Status |
Confidence |
Length |
6312 bases |
Strand |
Minus strand |
Position |
13 : 52240754 - 52247065 |
RNA binding domain |
Nop16 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_BALBcJ_P0037037 |
Nop16 |
PF09420 |
3.6e-23 |
1 |
MGP_BALBcJ_P0037037 |
Nop16 |
PF09420 |
3.6e-23 |
2 |
MGP_BALBcJ_P0037038 |
Nop16 |
PF09420 |
4e-23 |
1 |
MGP_BALBcJ_P0037038 |
Nop16 |
PF09420 |
4e-23 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Nop16-001 |
MGP_BALBcJ_T0037037 |
1756 |
178aa |
MGP_BALBcJ_P0037037"/note="transcript_id=MGP_BALBcJ_T0037037 |
- |
MGP_BALBcJ_T0037038 |
790 |
181aa |
MGP_BALBcJ_P0037038"/note="transcript_id=MGP_BALBcJ_T0037038 |
- |
MGP_BALBcJ_T0037039 |
677 |
36aa |
MGP_BALBcJ_P0037039"/note="transcript_id=MGP_BALBcJ_T0037039 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0020522 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 99.4475 | 98.3425 | mus_caroli | MGP_CAROLIEiJ_P0034413 | 99.4475 | 98.3425 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0037086 | 100 | 100 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0036977 | 100 | 100 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 99.4475 | mus_musculus_akrj | MGP_AKRJ_P0036986 | 100 | 99.4475 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0037494 | 100 | 100 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 99.4475 | mus_spicilegus | ENSMSIP00000008905 | 100 | 99.4475 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 99.4475 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0036807 | 100 | 99.4475 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0036791 | 100 | 100 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0036843 | 100 | 100 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0036812 | 100 | 100 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0037017 | 100 | 100 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 93.3702 | 91.7127 | rattus_norvegicus | ENSRNOP00000023320 | 94.9438 | 93.2584 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0036737 | 100 | 100 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0036207 | 100 | 100 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 99.4475 | 97.7901 | mus_spretus | MGP_SPRETEiJ_P0036048 | 99.4475 | 97.7901 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0036698 | 100 | 100 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 98.3425 | 96.1326 | mus_pahari | MGP_PahariEiJ_P0041019 | 96.7391 | 94.5652 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 99.4475 | 99.4475 | mus_musculus_pwkphj | MGP_PWKPhJ_P0036373 | 99.4475 | 99.4475 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 100 | mus_musculus | ENSMUSP00000122180 | 100 | 100 |
MGP_BALBcJ_G0020522 | mus_musculus_balbcj | MGP_BALBcJ_P0037038 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0037549 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |