Description

Ensembl ID MGP_BALBcJ_G0020522 Gene ID Accession -
Symbol Nop16 Alias - Full Name NOP16 nucleolar protein
Status Confidence Length 6312 bases Strand Minus strand
Position 13 : 52240754 - 52247065 RNA binding domain Nop16
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0037037 Nop16 PF09420 3.6e-23 1
MGP_BALBcJ_P0037037 Nop16 PF09420 3.6e-23 2
MGP_BALBcJ_P0037038 Nop16 PF09420 4e-23 1
MGP_BALBcJ_P0037038 Nop16 PF09420 4e-23 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Nop16-001 MGP_BALBcJ_T0037037 1756 178aa MGP_BALBcJ_P0037037"/note="transcript_id=MGP_BALBcJ_T0037037
- MGP_BALBcJ_T0037038 790 181aa MGP_BALBcJ_P0037038"/note="transcript_id=MGP_BALBcJ_T0037038
- MGP_BALBcJ_T0037039 677 36aa MGP_BALBcJ_P0037039"/note="transcript_id=MGP_BALBcJ_T0037039

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0020522

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P003703899.447598.3425mus_caroliMGP_CAROLIEiJ_P003441399.447598.3425
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P0037038100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0037086100100
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P0037038100100mus_musculus_lpjMGP_LPJ_P0036977100100
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P003703810099.4475mus_musculus_akrjMGP_AKRJ_P003698610099.4475
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P0037038100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0037494100100
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P003703810099.4475mus_spicilegusENSMSIP0000000890510099.4475
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P003703810099.4475mus_musculus_nodshiltjMGP_NODShiLtJ_P003680710099.4475
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P0037038100100mus_musculus_c3hhejMGP_C3HHeJ_P0036791100100
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P0037038100100mus_musculus_dba2jMGP_DBA2J_P0036843100100
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P0037038100100mus_musculus_fvbnjMGP_FVBNJ_P0036812100100
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P0037038100100mus_musculus_ajMGP_AJ_P0037017100100
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P003703893.370291.7127rattus_norvegicusENSRNOP0000002332094.943893.2584
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P0037038100100mus_musculus_casteijMGP_CASTEiJ_P0036737100100
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P0037038100100mus_musculus_wsbeijMGP_WSBEiJ_P0036207100100
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P003703899.447597.7901mus_spretusMGP_SPRETEiJ_P003604899.447597.7901
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P0037038100100mus_musculus_cbajMGP_CBAJ_P0036698100100
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P003703898.342596.1326mus_pahariMGP_PahariEiJ_P004101996.739194.5652
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P003703899.447599.4475mus_musculus_pwkphjMGP_PWKPhJ_P003637399.447599.4475
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P0037038100100mus_musculusENSMUSP00000122180100100
MGP_BALBcJ_G0020522mus_musculus_balbcjMGP_BALBcJ_P0037038100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0037549100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression