RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_BALBcJ_G0019822 | Gene ID |
|
Accession |
- |
Symbol |
Zfp36l1 |
Alias |
- |
Full Name |
zinc finger protein 36, C3H type-like 1 |
Status |
Confidence |
Length |
6363 bases |
Strand |
Minus strand |
Position |
12 : 77792566 - 77798928 |
RNA binding domain |
zf-CCCH , zf-CCCH_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_BALBcJ_P0035142 |
zf-CCCH |
PF00642 |
3.5e-22 |
1 |
MGP_BALBcJ_P0035142 |
zf-CCCH |
PF00642 |
3.5e-22 |
2 |
MGP_BALBcJ_P0035142 |
zf-CCCH_2 |
PF14608 |
1.6e-05 |
3 |
MGP_BALBcJ_P0035142 |
zf-CCCH_2 |
PF14608 |
1.6e-05 |
4 |
MGP_BALBcJ_P0035143 |
zf-CCCH |
PF00642 |
3.5e-22 |
1 |
MGP_BALBcJ_P0035143 |
zf-CCCH |
PF00642 |
3.5e-22 |
2 |
MGP_BALBcJ_P0035143 |
zf-CCCH_2 |
PF14608 |
1.6e-05 |
3 |
MGP_BALBcJ_P0035143 |
zf-CCCH_2 |
PF14608 |
1.6e-05 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Zfp36l1-201 |
MGP_BALBcJ_T0035142 |
3003 |
338aa |
MGP_BALBcJ_P0035142"/note="transcript_id=MGP_BALBcJ_T0035142 |
- |
MGP_BALBcJ_T0035143 |
2032 |
338aa |
MGP_BALBcJ_P0035143"/note="transcript_id=MGP_BALBcJ_T0035143 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0096149 | 24.4138 | 18.2069 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 52.3669 | 39.0533 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0082644 | 38.2445 | 31.9749 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 36.0947 | 30.1775 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0048641 | 48.3471 | 41.5289 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 69.2308 | 59.4675 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0032655 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0035220 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0035113 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0035128 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0035639 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 62.1302 | 62.1302 | mus_spicilegus | ENSMSIP00000002015 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0034968 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0034923 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0034979 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 98.8166 | 98.8166 | mus_musculus_fvbnj | MGP_FVBNJ_P0034964 | 98.8166 | 98.8166 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0035150 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 99.7041 | rattus_norvegicus | ENSRNOP00000075412 | 100 | 99.7041 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0034856 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0034377 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0034163 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0034837 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_pahari | MGP_PahariEiJ_P0082765 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 71.8935 | 71.5976 | mus_musculus_pwkphj | MGP_PWKPhJ_P0034545 | 89.6679 | 89.2989 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus | ENSMUSP00000021552 | 100 | 100 |
MGP_BALBcJ_G0019822 | mus_musculus_balbcj | MGP_BALBcJ_P0035142 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0035685 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |