Description

Ensembl ID MGP_BALBcJ_G0019822 Gene ID Accession -
Symbol Zfp36l1 Alias - Full Name zinc finger protein 36, C3H type-like 1
Status Confidence Length 6363 bases Strand Minus strand
Position 12 : 77792566 - 77798928 RNA binding domain zf-CCCH , zf-CCCH_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0035142 zf-CCCH PF00642 3.5e-22 1
MGP_BALBcJ_P0035142 zf-CCCH PF00642 3.5e-22 2
MGP_BALBcJ_P0035142 zf-CCCH_2 PF14608 1.6e-05 3
MGP_BALBcJ_P0035142 zf-CCCH_2 PF14608 1.6e-05 4
MGP_BALBcJ_P0035143 zf-CCCH PF00642 3.5e-22 1
MGP_BALBcJ_P0035143 zf-CCCH PF00642 3.5e-22 2
MGP_BALBcJ_P0035143 zf-CCCH_2 PF14608 1.6e-05 3
MGP_BALBcJ_P0035143 zf-CCCH_2 PF14608 1.6e-05 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Zfp36l1-201 MGP_BALBcJ_T0035142 3003 338aa MGP_BALBcJ_P0035142"/note="transcript_id=MGP_BALBcJ_T0035142
- MGP_BALBcJ_T0035143 2032 338aa MGP_BALBcJ_P0035143"/note="transcript_id=MGP_BALBcJ_T0035143

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P009614924.413818.2069mus_musculus_balbcjMGP_BALBcJ_P003514252.366939.0533
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P008264438.244531.9749mus_musculus_balbcjMGP_BALBcJ_P003514236.094730.1775
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P004864148.347141.5289mus_musculus_balbcjMGP_BALBcJ_P003514269.230859.4675

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_caroliMGP_CAROLIEiJ_P0032655100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0035220100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculus_lpjMGP_LPJ_P0035113100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculus_akrjMGP_AKRJ_P0035128100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0035639100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P003514262.130262.1302mus_spicilegusENSMSIP00000002015100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0034968100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculus_c3hhejMGP_C3HHeJ_P0034923100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculus_dba2jMGP_DBA2J_P0034979100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P003514298.816698.8166mus_musculus_fvbnjMGP_FVBNJ_P003496498.816698.8166
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculus_ajMGP_AJ_P0035150100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P003514210099.7041rattus_norvegicusENSRNOP0000007541210099.7041
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculus_casteijMGP_CASTEiJ_P0034856100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculus_wsbeijMGP_WSBEiJ_P0034377100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_spretusMGP_SPRETEiJ_P0034163100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculus_cbajMGP_CBAJ_P0034837100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_pahariMGP_PahariEiJ_P0082765100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P003514271.893571.5976mus_musculus_pwkphjMGP_PWKPhJ_P003454589.667989.2989
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculusENSMUSP00000021552100100
MGP_BALBcJ_G0019822mus_musculus_balbcjMGP_BALBcJ_P0035142100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0035685100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression