Description

Ensembl ID MGP_BALBcJ_G0019298 Gene ID Accession -
Symbol Rpl38 Alias - Full Name ribosomal protein L38
Status Confidence Length 3808 bases Strand Plus strand
Position 11 : 113861334 - 113865141 RNA binding domain Ribosomal_L38e
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0033255 Ribosomal_L38e PF01781 3.9e-36 1
MGP_BALBcJ_P0033256 Ribosomal_L38e PF01781 3.9e-36 1
MGP_BALBcJ_P0033257 Ribosomal_L38e PF01781 3.9e-36 1
MGP_BALBcJ_P0033258 Ribosomal_L38e PF01781 3.9e-36 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rpl38-001 MGP_BALBcJ_T0033255 371 70aa MGP_BALBcJ_P0033255"/note="transcript_id=MGP_BALBcJ_T0033255
- MGP_BALBcJ_T0033256 364 70aa MGP_BALBcJ_P0033256"/note="transcript_id=MGP_BALBcJ_T0033256
- MGP_BALBcJ_T0033257 457 70aa MGP_BALBcJ_P0033257"/note="transcript_id=MGP_BALBcJ_T0033257
- MGP_BALBcJ_T0033258 345 70aa MGP_BALBcJ_P0033258"/note="transcript_id=MGP_BALBcJ_T0033258

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0019298

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_caroliMGP_CAROLIEiJ_P0030793100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0033322100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_lpjMGP_LPJ_P0033224100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_akrjMGP_AKRJ_P0033254100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0033757100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_spicilegusENSMSIP0000003571357.851257.8512
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P003325798.571497.1429mus_spicilegusENSMSIP0000001107598.571497.1429
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0033092100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_c3hhejMGP_C3HHeJ_P0033043100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_dba2jMGP_DBA2J_P0033099100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_fvbnjMGP_FVBNJ_P0033088100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_ajMGP_AJ_P0033271100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P003325775.714364.2857rattus_norvegicusENSRNOP0000006971085.483972.5806
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_casteijMGP_CASTEiJ_P0032894100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_wsbeijMGP_WSBEiJ_P0032508100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_spretusMGP_SPRETEiJ_P0032242100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_cbajMGP_CBAJ_P0032956100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_pahariMGP_PahariEiJ_P0037520100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_pwkphjMGP_PWKPhJ_P0032594100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculusENSMUSP00000102209100100
MGP_BALBcJ_G0019298mus_musculus_balbcjMGP_BALBcJ_P0033257100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0033795100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression