RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_BALBcJ_G0019166 | Gene ID |
|
Accession |
- |
Symbol |
Lsm12 |
Alias |
- |
Full Name |
LSM12 homolog |
Status |
Confidence |
Length |
27301 bases |
Strand |
Minus strand |
Position |
11 : 101159976 - 101187276 |
RNA binding domain |
AD |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_BALBcJ_P0032609 |
AD |
PF09793 |
3.9e-23 |
1 |
MGP_BALBcJ_P0032608 |
AD |
PF09793 |
1.2e-22 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Lsm12-001 |
MGP_BALBcJ_T0032608 |
2004 |
137aa |
MGP_BALBcJ_P0032608"/note="transcript_id=MGP_BALBcJ_T0032608 |
- |
MGP_BALBcJ_T0032609 |
2245 |
195aa |
MGP_BALBcJ_P0032609"/note="transcript_id=MGP_BALBcJ_T0032609 |
- |
MGP_BALBcJ_T0032610 |
570 |
No protein |
- |
- |
MGP_BALBcJ_T0032611 |
488 |
No protein |
- |
- |
MGP_BALBcJ_T0032612 |
408 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0019166 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 99.4872 | 99.4872 | mus_caroli | MGP_CAROLIEiJ_P0030172 | 99.4872 | 99.4872 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0032676 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0032574 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0032602 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 70.2564 | 70.2564 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0033116 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_spicilegus | ENSMSIP00000033782 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0032444 | 89.0411 | 89.0411 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0032397 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0032455 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 70.2564 | 70.2564 | mus_musculus_fvbnj | MGP_FVBNJ_P0032448 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0032618 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | rattus_norvegicus | ENSRNOP00000096334 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0032215 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 70.2564 | 70.2564 | mus_musculus_wsbeij | MGP_WSBEiJ_P0031866 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 99.4872 | 99.4872 | mus_spretus | MGP_SPRETEiJ_P0031605 | 99.4872 | 99.4872 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 94.8718 | 94.8718 | mus_musculus_cbaj | MGP_CBAJ_P0032311 | 91.5842 | 91.5842 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_pahari | MGP_PahariEiJ_P0036900 | 91.9811 | 91.9811 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0031917 | 87.4439 | 87.4439 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_musculus | ENSMUSP00000021297 | 100 | 100 |
MGP_BALBcJ_G0019166 | mus_musculus_balbcj | MGP_BALBcJ_P0032609 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0033146 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |