Description

Ensembl ID MGP_BALBcJ_G0019166 Gene ID Accession -
Symbol Lsm12 Alias - Full Name LSM12 homolog
Status Confidence Length 27301 bases Strand Minus strand
Position 11 : 101159976 - 101187276 RNA binding domain AD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0032609 AD PF09793 3.9e-23 1
MGP_BALBcJ_P0032608 AD PF09793 1.2e-22 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Lsm12-001 MGP_BALBcJ_T0032608 2004 137aa MGP_BALBcJ_P0032608"/note="transcript_id=MGP_BALBcJ_T0032608
- MGP_BALBcJ_T0032609 2245 195aa MGP_BALBcJ_P0032609"/note="transcript_id=MGP_BALBcJ_T0032609
- MGP_BALBcJ_T0032610 570 No protein -
- MGP_BALBcJ_T0032611 488 No protein -
- MGP_BALBcJ_T0032612 408 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0019166

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P003260999.487299.4872mus_caroliMGP_CAROLIEiJ_P003017299.487299.4872
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0032676100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_musculus_lpjMGP_LPJ_P0032574100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_musculus_akrjMGP_AKRJ_P0032602100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P003260970.256470.2564mus_musculus_c57bl6njMGP_C57BL6NJ_P0033116100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_spicilegusENSMSIP00000033782100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_musculus_nodshiltjMGP_NODShiLtJ_P003244489.041189.0411
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_musculus_c3hhejMGP_C3HHeJ_P0032397100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_musculus_dba2jMGP_DBA2J_P0032455100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P003260970.256470.2564mus_musculus_fvbnjMGP_FVBNJ_P0032448100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_musculus_ajMGP_AJ_P0032618100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100rattus_norvegicusENSRNOP00000096334100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_musculus_casteijMGP_CASTEiJ_P0032215100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P003260970.256470.2564mus_musculus_wsbeijMGP_WSBEiJ_P0031866100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P003260999.487299.4872mus_spretusMGP_SPRETEiJ_P003160599.487299.4872
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P003260994.871894.8718mus_musculus_cbajMGP_CBAJ_P003231191.584291.5842
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_pahariMGP_PahariEiJ_P003690091.981191.9811
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_musculus_pwkphjMGP_PWKPhJ_P003191787.443987.4439
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_musculusENSMUSP00000021297100100
MGP_BALBcJ_G0019166mus_musculus_balbcjMGP_BALBcJ_P0032609100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0033146100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression