RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_BALBcJ_G0017809 | Gene ID |
|
Accession |
- |
Symbol |
Zc3h10 |
Alias |
- |
Full Name |
zinc finger CCCH type containing 10 |
Status |
Confidence |
Length |
5815 bases |
Strand |
Minus strand |
Position |
10 : 127355393 - 127361207 |
RNA binding domain |
zf-CCCH , zf-CCCH_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_BALBcJ_P0027459 |
zf-CCCH |
PF00642 |
4.3e-12 |
1 |
MGP_BALBcJ_P0027459 |
zf-CCCH_2 |
PF14608 |
1.1e-07 |
2 |
MGP_BALBcJ_P0027459 |
zf-CCCH_2 |
PF14608 |
1.1e-07 |
3 |
MGP_BALBcJ_P0027459 |
zf-CCCH_2 |
PF14608 |
1.1e-07 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Zc3h10-001 |
MGP_BALBcJ_T0027459 |
3724 |
435aa |
MGP_BALBcJ_P0027459"/note="transcript_id=MGP_BALBcJ_T0027459 |
- |
MGP_BALBcJ_T0027460 |
757 |
No protein |
- |
- |
MGP_BALBcJ_T0027461 |
992 |
No protein |
- |
- |
MGP_BALBcJ_T0027462 |
565 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0060955 | 31.5789 | 20.0957 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 30.3448 | 19.3103 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0040341 | 32.9759 | 20.3753 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 28.2759 | 17.4713 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0096106 | 33.9181 | 21.0526 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 26.6667 | 16.5517 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 99.7701 | 99.7701 | mus_caroli | MGP_CAROLIEiJ_P0025165 | 99.7701 | 99.7701 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0027515 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0027434 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_akrj | MGP_AKRJ_P0027452 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0027967 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_spicilegus | ENSMSIP00000000964 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0027294 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0027267 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0027319 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0027309 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0027481 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 99.0805 | 98.8506 | rattus_norvegicus | ENSRNOP00000081152 | 99.0805 | 98.8506 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 99.7701 | 99.5402 | mus_musculus_casteij | MGP_CASTEiJ_P0026868 | 99.7701 | 99.5402 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0026786 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 99.7701 | 99.5402 | mus_spretus | MGP_SPRETEiJ_P0026454 | 99.7701 | 99.5402 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0027195 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 99.5402 | 99.5402 | mus_pahari | MGP_PahariEiJ_P0087503 | 99.5402 | 99.5402 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0026569 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus | ENSMUSP00000042727 | 100 | 100 |
MGP_BALBcJ_G0017809 | mus_musculus_balbcj | MGP_BALBcJ_P0027459 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0027990 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |