Description

Ensembl ID MGP_BALBcJ_G0017809 Gene ID Accession -
Symbol Zc3h10 Alias - Full Name zinc finger CCCH type containing 10
Status Confidence Length 5815 bases Strand Minus strand
Position 10 : 127355393 - 127361207 RNA binding domain zf-CCCH , zf-CCCH_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_BALBcJ_P0027459 zf-CCCH PF00642 4.3e-12 1
MGP_BALBcJ_P0027459 zf-CCCH_2 PF14608 1.1e-07 2
MGP_BALBcJ_P0027459 zf-CCCH_2 PF14608 1.1e-07 3
MGP_BALBcJ_P0027459 zf-CCCH_2 PF14608 1.1e-07 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Zc3h10-001 MGP_BALBcJ_T0027459 3724 435aa MGP_BALBcJ_P0027459"/note="transcript_id=MGP_BALBcJ_T0027459
- MGP_BALBcJ_T0027460 757 No protein -
- MGP_BALBcJ_T0027461 992 No protein -
- MGP_BALBcJ_T0027462 565 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P006095531.578920.0957mus_musculus_balbcjMGP_BALBcJ_P002745930.344819.3103
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P004034132.975920.3753mus_musculus_balbcjMGP_BALBcJ_P002745928.275917.4713
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P009610633.918121.0526mus_musculus_balbcjMGP_BALBcJ_P002745926.666716.5517

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P002745999.770199.7701mus_caroliMGP_CAROLIEiJ_P002516599.770199.7701
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0027515100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_lpjMGP_LPJ_P0027434100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_akrjMGP_AKRJ_P0027452100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0027967100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_spicilegusENSMSIP00000000964100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0027294100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_c3hhejMGP_C3HHeJ_P0027267100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_dba2jMGP_DBA2J_P0027319100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_fvbnjMGP_FVBNJ_P0027309100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_ajMGP_AJ_P0027481100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P002745999.080598.8506rattus_norvegicusENSRNOP0000008115299.080598.8506
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P002745999.770199.5402mus_musculus_casteijMGP_CASTEiJ_P002686899.770199.5402
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_wsbeijMGP_WSBEiJ_P0026786100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P002745999.770199.5402mus_spretusMGP_SPRETEiJ_P002645499.770199.5402
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_cbajMGP_CBAJ_P0027195100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P002745999.540299.5402mus_pahariMGP_PahariEiJ_P008750399.540299.5402
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_pwkphjMGP_PWKPhJ_P0026569100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculusENSMUSP00000042727100100
MGP_BALBcJ_G0017809mus_musculus_balbcjMGP_BALBcJ_P0027459100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0027990100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression