RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_AKRJ_G0028159 | Gene ID |
|
Accession |
- |
Symbol |
Tdrd7 |
Alias |
- |
Full Name |
tudor domain containing 7 |
Status |
Confidence |
Length |
76759 bases |
Strand |
Plus strand |
Position |
4 : 43661107 - 43737865 |
RNA binding domain |
OST-HTH , TUDOR |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_AKRJ_P0065518 |
OST-HTH |
PF12872 |
3.2e-17 |
1 |
MGP_AKRJ_P0065518 |
OST-HTH |
PF12872 |
3.2e-17 |
2 |
MGP_AKRJ_P0065518 |
TUDOR |
PF00567 |
9.2e-85 |
3 |
MGP_AKRJ_P0065518 |
TUDOR |
PF00567 |
9.2e-85 |
4 |
MGP_AKRJ_P0065518 |
TUDOR |
PF00567 |
9.2e-85 |
5 |
MGP_AKRJ_P0065517 |
OST-HTH |
PF12872 |
3.5e-17 |
1 |
MGP_AKRJ_P0065517 |
OST-HTH |
PF12872 |
3.5e-17 |
2 |
MGP_AKRJ_P0065517 |
TUDOR |
PF00567 |
1e-84 |
3 |
MGP_AKRJ_P0065517 |
TUDOR |
PF00567 |
1e-84 |
4 |
MGP_AKRJ_P0065517 |
TUDOR |
PF00567 |
1e-84 |
5 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Tdrd7-001 |
MGP_AKRJ_T0065517 |
3655 |
1119aa |
MGP_AKRJ_P0065517"/note="transcript_id=MGP_AKRJ_T0065517 |
- |
MGP_AKRJ_T0065518 |
3716 |
1086aa |
MGP_AKRJ_P0065518"/note="transcript_id=MGP_AKRJ_T0065518 |
- |
MGP_AKRJ_T0065519 |
260 |
No protein |
- |
- |
MGP_AKRJ_T0065520 |
618 |
No protein |
- |
- |
MGP_AKRJ_T0065521 |
525 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0022742 | 22.1154 | 11.0577 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 20.5541 | 10.277 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0052162 | 28.4983 | 16.5529 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 29.8481 | 17.3369 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0062159 | 29.322 | 16.6102 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 15.4602 | 8.75782 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0047724 | 16.1124 | 9.274 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 30.7417 | 17.6944 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0065573 | 100 | 100 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0065628 | 100 | 100 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0065557 | 100 | 100 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 99.1063 | 98.1233 | mus_caroli | MGP_CAROLIEiJ_P0062226 | 99.1063 | 98.1233 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0065228 | 100 | 100 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0065412 | 100 | 100 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0065237 | 100 | 100 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0065218 | 100 | 100 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0066027 | 100 | 100 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0066198 | 100 | 100 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0065175 | 100 | 100 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0065308 | 100 | 100 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 99.9106 | mus_musculus_wsbeij | MGP_WSBEiJ_P0064433 | 100 | 99.9106 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 99.6425 | 99.3744 | mus_spicilegus | ENSMSIP00000024111 | 99.6425 | 99.3744 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 97.6765 | 95.4424 | rattus_norvegicus | ENSRNOP00000070639 | 97.6765 | 95.4424 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 99.8213 | 99.3744 | mus_spretus | MGP_SPRETEiJ_P0064696 | 99.8213 | 99.3744 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 100 | mus_musculus | ENSMUSP00000103406 | 100 | 100 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 99.8213 | mus_musculus_casteij | MGP_CASTEiJ_P0065541 | 100 | 99.8213 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 100 | 99.9106 | mus_musculus_pwkphj | MGP_PWKPhJ_P0065087 | 100 | 99.9106 |
MGP_AKRJ_G0028159 | mus_musculus_akrj | MGP_AKRJ_P0065517 | 97.8552 | 96.5147 | mus_pahari | MGP_PahariEiJ_P0077365 | 98.0304 | 96.6876 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |