Description

Ensembl ID MGP_AKRJ_G0028159 Gene ID Accession -
Symbol Tdrd7 Alias - Full Name tudor domain containing 7
Status Confidence Length 76759 bases Strand Plus strand
Position 4 : 43661107 - 43737865 RNA binding domain OST-HTH , TUDOR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_AKRJ_P0065518 OST-HTH PF12872 3.2e-17 1
MGP_AKRJ_P0065518 OST-HTH PF12872 3.2e-17 2
MGP_AKRJ_P0065518 TUDOR PF00567 9.2e-85 3
MGP_AKRJ_P0065518 TUDOR PF00567 9.2e-85 4
MGP_AKRJ_P0065518 TUDOR PF00567 9.2e-85 5
MGP_AKRJ_P0065517 OST-HTH PF12872 3.5e-17 1
MGP_AKRJ_P0065517 OST-HTH PF12872 3.5e-17 2
MGP_AKRJ_P0065517 TUDOR PF00567 1e-84 3
MGP_AKRJ_P0065517 TUDOR PF00567 1e-84 4
MGP_AKRJ_P0065517 TUDOR PF00567 1e-84 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Tdrd7-001 MGP_AKRJ_T0065517 3655 1119aa MGP_AKRJ_P0065517"/note="transcript_id=MGP_AKRJ_T0065517
- MGP_AKRJ_T0065518 3716 1086aa MGP_AKRJ_P0065518"/note="transcript_id=MGP_AKRJ_T0065518
- MGP_AKRJ_T0065519 260 No protein -
- MGP_AKRJ_T0065520 618 No protein -
- MGP_AKRJ_T0065521 525 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P002274222.115411.0577mus_musculus_akrjMGP_AKRJ_P006551720.554110.277
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P005216228.498316.5529mus_musculus_akrjMGP_AKRJ_P006551729.848117.3369
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P006215929.32216.6102mus_musculus_akrjMGP_AKRJ_P006551715.46028.75782
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P004772416.11249.274mus_musculus_akrjMGP_AKRJ_P006551730.741717.6944

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P0065517100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0065573100100
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P0065517100100mus_musculus_ajMGP_AJ_P0065628100100
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P0065517100100mus_musculus_balbcjMGP_BALBcJ_P0065557100100
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P006551799.106398.1233mus_caroliMGP_CAROLIEiJ_P006222699.106398.1233
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P0065517100100mus_musculus_c3hhejMGP_C3HHeJ_P0065228100100
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P0065517100100mus_musculus_lpjMGP_LPJ_P0065412100100
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P0065517100100mus_musculus_fvbnjMGP_FVBNJ_P0065237100100
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P0065517100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0065218100100
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P0065517100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0066027100100
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P0065517100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0066198100100
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P0065517100100mus_musculus_cbajMGP_CBAJ_P0065175100100
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P0065517100100mus_musculus_dba2jMGP_DBA2J_P0065308100100
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P006551710099.9106mus_musculus_wsbeijMGP_WSBEiJ_P006443310099.9106
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P006551799.642599.3744mus_spicilegusENSMSIP0000002411199.642599.3744
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P006551797.676595.4424rattus_norvegicusENSRNOP0000007063997.676595.4424
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P006551799.821399.3744mus_spretusMGP_SPRETEiJ_P006469699.821399.3744
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P0065517100100mus_musculusENSMUSP00000103406100100
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P006551710099.8213mus_musculus_casteijMGP_CASTEiJ_P006554110099.8213
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P006551710099.9106mus_musculus_pwkphjMGP_PWKPhJ_P006508710099.9106
MGP_AKRJ_G0028159mus_musculus_akrjMGP_AKRJ_P006551797.855296.5147mus_pahariMGP_PahariEiJ_P007736598.030496.6876

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression