RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_AKRJ_G0027521 | Gene ID |
|
Accession |
- |
Symbol |
Prpf3 |
Alias |
- |
Full Name |
pre-mRNA processing factor 3 |
Status |
Confidence |
Length |
28046 bases |
Strand |
Minus strand |
Position |
3 : 95763413 - 95791458 |
RNA binding domain |
PWI , PRP3 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_AKRJ_P0062453 |
PWI |
PF01480 |
8.5e-15 |
1 |
MGP_AKRJ_P0062446 |
PWI |
PF01480 |
1.7e-13 |
1 |
MGP_AKRJ_P0062446 |
PRP3 |
PF08572 |
7.2e-75 |
2 |
MGP_AKRJ_P0062450 |
PWI |
PF01480 |
1.7e-13 |
1 |
MGP_AKRJ_P0062450 |
PRP3 |
PF08572 |
7.2e-75 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Prpf3-001 |
MGP_AKRJ_T0062446 |
2933 |
683aa |
MGP_AKRJ_P0062446"/note="transcript_id=MGP_AKRJ_T0062446 |
- |
MGP_AKRJ_T0062447 |
575 |
114aa |
MGP_AKRJ_P0062447"/note="transcript_id=MGP_AKRJ_T0062447 |
- |
MGP_AKRJ_T0062448 |
2548 |
No protein |
- |
- |
MGP_AKRJ_T0062449 |
592 |
No protein |
- |
- |
MGP_AKRJ_T0062450 |
2732 |
683aa |
MGP_AKRJ_P0062450"/note="transcript_id=MGP_AKRJ_T0062450 |
- |
MGP_AKRJ_T0062451 |
554 |
No protein |
- |
- |
MGP_AKRJ_T0062452 |
1800 |
No protein |
- |
- |
MGP_AKRJ_T0062453 |
800 |
101aa |
MGP_AKRJ_P0062453"/note="transcript_id=MGP_AKRJ_T0062453 |
- |
MGP_AKRJ_T0062454 |
613 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AKRJ_G0027521 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0062487 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0062511 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0062437 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_caroli | MGP_CAROLIEiJ_P0059238 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0062120 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0062341 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0062179 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0062174 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0062936 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0063128 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0062092 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0062200 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0061395 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 99.8536 | 99.8536 | mus_spicilegus | ENSMSIP00000008288 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 94.5827 | 93.5578 | rattus_norvegicus | ENSRNOP00000068727 | 98.0273 | 96.9651 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0061614 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus | ENSMUSP00000015892 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0062424 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0061963 | 100 | 100 |
MGP_AKRJ_G0027521 | mus_musculus_akrj | MGP_AKRJ_P0062446 | 99.8536 | 99.8536 | mus_pahari | MGP_PahariEiJ_P0070206 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |