Description

Ensembl ID MGP_AKRJ_G0027521 Gene ID Accession -
Symbol Prpf3 Alias - Full Name pre-mRNA processing factor 3
Status Confidence Length 28046 bases Strand Minus strand
Position 3 : 95763413 - 95791458 RNA binding domain PWI , PRP3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_AKRJ_P0062453 PWI PF01480 8.5e-15 1
MGP_AKRJ_P0062446 PWI PF01480 1.7e-13 1
MGP_AKRJ_P0062446 PRP3 PF08572 7.2e-75 2
MGP_AKRJ_P0062450 PWI PF01480 1.7e-13 1
MGP_AKRJ_P0062450 PRP3 PF08572 7.2e-75 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Prpf3-001 MGP_AKRJ_T0062446 2933 683aa MGP_AKRJ_P0062446"/note="transcript_id=MGP_AKRJ_T0062446
- MGP_AKRJ_T0062447 575 114aa MGP_AKRJ_P0062447"/note="transcript_id=MGP_AKRJ_T0062447
- MGP_AKRJ_T0062448 2548 No protein -
- MGP_AKRJ_T0062449 592 No protein -
- MGP_AKRJ_T0062450 2732 683aa MGP_AKRJ_P0062450"/note="transcript_id=MGP_AKRJ_T0062450
- MGP_AKRJ_T0062451 554 No protein -
- MGP_AKRJ_T0062452 1800 No protein -
- MGP_AKRJ_T0062453 800 101aa MGP_AKRJ_P0062453"/note="transcript_id=MGP_AKRJ_T0062453
- MGP_AKRJ_T0062454 613 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AKRJ_G0027521

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0062487100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_ajMGP_AJ_P0062511100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_balbcjMGP_BALBcJ_P0062437100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_caroliMGP_CAROLIEiJ_P0059238100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_c3hhejMGP_C3HHeJ_P0062120100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_lpjMGP_LPJ_P0062341100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_fvbnjMGP_FVBNJ_P0062179100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0062174100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0062936100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0063128100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_cbajMGP_CBAJ_P0062092100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_dba2jMGP_DBA2J_P0062200100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_wsbeijMGP_WSBEiJ_P0061395100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P006244699.853699.8536mus_spicilegusENSMSIP00000008288100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P006244694.582793.5578rattus_norvegicusENSRNOP0000006872798.027396.9651
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_spretusMGP_SPRETEiJ_P0061614100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculusENSMUSP00000015892100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_casteijMGP_CASTEiJ_P0062424100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P0062446100100mus_musculus_pwkphjMGP_PWKPhJ_P0061963100100
MGP_AKRJ_G0027521mus_musculus_akrjMGP_AKRJ_P006244699.853699.8536mus_pahariMGP_PahariEiJ_P0070206100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression