Description

Ensembl ID MGP_AKRJ_G0019960 Gene ID Accession -
Symbol Cpsf2 Alias - Full Name cleavage and polyadenylation specific factor 2
Status Confidence Length 32859 bases Strand Plus strand
Position 12 : 102446343 - 102479201 RNA binding domain Lactamase_B , Beta-Casp , RMMBL
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_AKRJ_P0035634 Lactamase_B PF00753 3.2e-05 1
MGP_AKRJ_P0035634 Beta-Casp PF10996 1.9e-19 2
MGP_AKRJ_P0035634 RMMBL PF07521 5.6e-17 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Cpsf2-201 MGP_AKRJ_T0035634 5315 782aa MGP_AKRJ_P0035634"/note="transcript_id=MGP_AKRJ_T0035634

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P003979932.314417.0306mus_musculus_akrjMGP_AKRJ_P003563428.388714.9616
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P003444339.619920.3216mus_musculus_akrjMGP_AKRJ_P003563434.654717.7749
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P00698464324.5mus_musculus_akrjMGP_AKRJ_P003563432.992318.798

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0035731100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_ajMGP_AJ_P0035653100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_balbcjMGP_BALBcJ_P0035657100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P003563410099.3606mus_caroliMGP_CAROLIEiJ_P003314110099.3606
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_c3hhejMGP_C3HHeJ_P0035430100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_lpjMGP_LPJ_P0035621100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_fvbnjMGP_FVBNJ_P0035470100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0035474100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0036149100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0036180100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_cbajMGP_CBAJ_P0035350100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_dba2jMGP_DBA2J_P0035484100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_wsbeijMGP_WSBEiJ_P0034872100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_spicilegusENSMSIP0000003700597.7597.75
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P003563499.872199.1049rattus_norvegicusENSRNOP0000007520997.62596.875
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_spretusMGP_SPRETEiJ_P0034664100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculusENSMUSP00000047797100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_casteijMGP_CASTEiJ_P0035364100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P0035634100100mus_musculus_pwkphjMGP_PWKPhJ_P0035040100100
MGP_AKRJ_G0019960mus_musculus_akrjMGP_AKRJ_P003563410099.4885mus_pahariMGP_PahariEiJ_P008325410099.4885

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression