RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | MGP_AKRJ_G0019960 | Gene ID |
|
Accession |
- |
Symbol |
Cpsf2 |
Alias |
- |
Full Name |
cleavage and polyadenylation specific factor 2 |
Status |
Confidence |
Length |
32859 bases |
Strand |
Plus strand |
Position |
12 : 102446343 - 102479201 |
RNA binding domain |
Lactamase_B , Beta-Casp , RMMBL |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
MGP_AKRJ_P0035634 |
Lactamase_B |
PF00753 |
3.2e-05 |
1 |
MGP_AKRJ_P0035634 |
Beta-Casp |
PF10996 |
1.9e-19 |
2 |
MGP_AKRJ_P0035634 |
RMMBL |
PF07521 |
5.6e-17 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
Cpsf2-201 |
MGP_AKRJ_T0035634 |
5315 |
782aa |
MGP_AKRJ_P0035634"/note="transcript_id=MGP_AKRJ_T0035634 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0039799 | 32.3144 | 17.0306 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 28.3887 | 14.9616 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0034443 | 39.6199 | 20.3216 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 34.6547 | 17.7749 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0069846 | 43 | 24.5 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 32.9923 | 18.798 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_129s1svimj | MGP_129S1SvImJ_P0035731 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_aj | MGP_AJ_P0035653 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_balbcj | MGP_BALBcJ_P0035657 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 99.3606 | mus_caroli | MGP_CAROLIEiJ_P0033141 | 100 | 99.3606 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_c3hhej | MGP_C3HHeJ_P0035430 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_lpj | MGP_LPJ_P0035621 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_fvbnj | MGP_FVBNJ_P0035470 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_nodshiltj | MGP_NODShiLtJ_P0035474 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_c57bl6nj | MGP_C57BL6NJ_P0036149 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_nzohlltj | MGP_NZOHlLtJ_P0036180 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_cbaj | MGP_CBAJ_P0035350 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_dba2j | MGP_DBA2J_P0035484 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_wsbeij | MGP_WSBEiJ_P0034872 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_spicilegus | ENSMSIP00000037005 | 97.75 | 97.75 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 99.8721 | 99.1049 | rattus_norvegicus | ENSRNOP00000075209 | 97.625 | 96.875 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_spretus | MGP_SPRETEiJ_P0034664 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus | ENSMUSP00000047797 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_casteij | MGP_CASTEiJ_P0035364 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 100 | mus_musculus_pwkphj | MGP_PWKPhJ_P0035040 | 100 | 100 |
MGP_AKRJ_G0019960 | mus_musculus_akrj | MGP_AKRJ_P0035634 | 100 | 99.4885 | mus_pahari | MGP_PahariEiJ_P0083254 | 100 | 99.4885 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |