Description

Ensembl ID MGP_AKRJ_G0019561 Gene ID Accession -
Symbol Cpsf3 Alias - Full Name cleavage and polyadenylation specificity factor 3
Status Confidence Length 32254 bases Strand Plus strand
Position 12 : 18964593 - 18996846 RNA binding domain Lactamase_B , Beta-Casp , CPSF73-100_C , RMMBL
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
MGP_AKRJ_P0034443 Lactamase_B PF00753 4.1e-18 1
MGP_AKRJ_P0034443 Beta-Casp PF10996 9.9e-31 2
MGP_AKRJ_P0034443 CPSF73-100_C PF11718 1.5e-54 3
MGP_AKRJ_P0034443 RMMBL PF07521 4.9e-15 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Cpsf3-201 MGP_AKRJ_T0034443 2560 684aa MGP_AKRJ_P0034443"/note="transcript_id=MGP_AKRJ_T0034443

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P003979934.061118.9229mus_musculus_akrjMGP_AKRJ_P003444334.210519.0058
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P003563434.654717.7749mus_musculus_akrjMGP_AKRJ_P003444339.619920.3216
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P006984655.534.3333mus_musculus_akrjMGP_AKRJ_P003444348.684230.117

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_129s1svimjMGP_129S1SvImJ_P0034526100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_ajMGP_AJ_P0034458100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_balbcjMGP_BALBcJ_P0034456100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_caroliMGP_CAROLIEiJ_P0031982100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_c3hhejMGP_C3HHeJ_P0034237100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_lpjMGP_LPJ_P0034430100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_fvbnjMGP_FVBNJ_P0034285100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_nodshiltjMGP_NODShiLtJ_P0034293100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_c57bl6njMGP_C57BL6NJ_P0034955100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_nzohlltjMGP_NZOHlLtJ_P0035002100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_cbajMGP_CBAJ_P0034150100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_dba2jMGP_DBA2J_P0034290100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_wsbeijMGP_WSBEiJ_P0033705100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_spicilegusENSMSIP00000026604100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P003444396.783696.0526rattus_norvegicusENSRNOP0000008232696.642395.9124
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_spretusMGP_SPRETEiJ_P0033448100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculusENSMUSP00000068148100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P003444310099.8538mus_musculus_casteijMGP_CASTEiJ_P003414910099.8538
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P0034443100100mus_musculus_pwkphjMGP_PWKPhJ_P0033833100100
MGP_AKRJ_G0019561mus_musculus_akrjMGP_AKRJ_P003444310099.8538mus_pahariMGP_PahariEiJ_P008210010099.8538

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression